G216270


Basic Information

Item Value
gene id G216270
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 2376319 ~ 2376682 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU246320
ccatggcggagatctttttGGGCTATACTTGGTGGTatagttggtggttgaagatatccctctagtggtgtgggggctgtgctttggcaaagtgggtggggttatatccttcctgtttggccctgtccgggggtgtcctcggatggggccacagtgtctcctgacccctcctgtctcagcctccagtatttatgctgcaatagtttgtgtgtcggggggctagggtcagtttgttatgtctggagtacttctcctgtcctattcggtgtcctgtgtgaatctaagtgtgcgttctctaattctctccttctctctttctttctctctctcagaggacctgagccctaggaccatgccccaggac

Function

NR:

description
ZK1236.4, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246320 True 364 lncRNA 0.49 1 2376319 2376682

Neighbor

gene id symbol gene type direction distance location
abcb5 LOC106574003 coding upstream 92005 2258551 ~ 2284314 (+)
LOC110513668 LOC106595161 coding upstream 252415 2010277 ~ 2123904 (+)
ahr1a LOC106605709 coding upstream 388839 1960781 ~ 1987480 (+)
LOC118944758 LOC100136727 coding upstream 491413 1882585 ~ 1884906 (+)
LOC118944757 LOC100136727 coding upstream 498235 1875760 ~ 1878084 (+)
LOC118944474 NA coding downstream 37789 2414471 ~ 2419132 (+)
fhod3b fhod3 coding downstream 229341 2606023 ~ 2853339 (+)
LOC110517892 LOC106606083 coding downstream 494730 2871412 ~ 2883602 (+)
LOC110520727 LOC106606081 coding downstream 547759 2924441 ~ 2943873 (+)
LOC110520728 LOC106606086 coding downstream 573683 2950365 ~ 2963921 (+)
G216237 NA non-coding upstream 41934 2333774 ~ 2334385 (+)
G216226 NA non-coding upstream 64131 2311726 ~ 2312188 (+)
G216214 NA non-coding upstream 74889 2301135 ~ 2301430 (+)
G216119 NA non-coding upstream 149680 2224683 ~ 2226639 (+)
G216111 NA non-coding upstream 181936 2193884 ~ 2194383 (+)
G216277 NA non-coding downstream 3785 2380467 ~ 2380739 (+)
G216354 NA non-coding downstream 90016 2466698 ~ 2467315 (+)
G216357 LOC106605879 non-coding downstream 100738 2477420 ~ 2483732 (+)
G216362 NA non-coding downstream 107568 2484250 ~ 2484675 (+)
G216416 NA non-coding downstream 160007 2536689 ~ 2537038 (+)
G215843 LOC100136727 other upstream 571064 1804388 ~ 1805255 (+)
G215830 NA other upstream 629037 1670411 ~ 1747282 (+)
LOC118944469 LOC100136727 other upstream 696212 1635598 ~ 1680107 (+)
G215820 LOC100136727 other upstream 759940 1609638 ~ 1616379 (+)
G216353 NA other downstream 84535 2461217 ~ 2462744 (+)
G216438 NA other downstream 195713 2572395 ~ 2574899 (+)
LOC110506718 LOC102207154 other downstream 640482 3017105 ~ 3022686 (+)
G216640 LOC106606088 other downstream 663304 3039986 ~ 3041517 (+)
G216673 NA other downstream 729672 3106354 ~ 3108233 (+)

Expression


Co-expression Network