G216391


Basic Information

Item Value
gene id G216391
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 2484522 ~ 2484973 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU246466
ATAAATGTACAgtcaactagacatagacaataacccacaaattACACAaacaatatggctgcctaaatatggttcctaatcagagacaacgataaacagctgcctctgattgagaaccactccagacagccatagagatacataacacctagactagtaaacacccatagacatgcaaaacccctagacagggccaaaacacatacatcacccatgtcacaccctgacctaaccaaaataataaagaaaacaaagaatactaaggtcagggcgtgacaactattTATaattttggcaacttttactacactacattcataaacaaaataatgtactttttactccatacatttccctgatacacaaagtacttgttacattttgacaggaaaatggtccaattcacacacttatcaagagaatatccttggtcatccctactgcctctgatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246466 True 452 lncRNA 0.37 1 2484522 2484973

Neighbor

gene id symbol gene type direction distance location
LOC118944775 NA coding downstream 96223 2354283 ~ 2388299 (-)
sp8b LOC106573674 coding downstream 192516 2286294 ~ 2292006 (-)
LOC110506602 LOC106595809 coding downstream 235013 2243487 ~ 2249509 (-)
LOC118944471 LOC106573719 coding downstream 255084 2225818 ~ 2229438 (-)
LOC118936266 twist1 coding downstream 289096 2193797 ~ 2195426 (-)
LOC118964348 LOC106605991 coding upstream 61261 2546234 ~ 2553372 (-)
LOC110519055 LOC106606020 coding upstream 82067 2567040 ~ 2581440 (-)
LOC110520772 LOC108270036 coding upstream 98267 2583240 ~ 2604766 (-)
LOC110517891 LOC106606082 coding upstream 371125 2856098 ~ 2869094 (-)
c4b c4 coding upstream 404098 2889071 ~ 2916355 (-)
G216390 NA non-coding downstream 483 2483834 ~ 2484039 (-)
LOC118944776 LOC105018831 non-coding downstream 21151 2461163 ~ 2521910 (-)
G216271 NA non-coding downstream 107754 2376533 ~ 2376768 (-)
G216269 NA non-coding downstream 108470 2375734 ~ 2376052 (-)
G216258 NA non-coding downstream 128189 2355672 ~ 2356333 (-)
G216411 NA non-coding upstream 39362 2524335 ~ 2524542 (-)
G216464 NA non-coding upstream 83124 2568097 ~ 2570484 (-)
G216757 NA non-coding upstream 143731 2628704 ~ 2628916 (-)
G216765 NA non-coding upstream 163944 2648917 ~ 2649344 (-)
G216767 NA non-coding upstream 169305 2654278 ~ 2654615 (-)
G216059 NA other downstream 359170 2124176 ~ 2125352 (-)
G216066 NA other downstream 362665 2121203 ~ 2121857 (-)
G216038 NA other downstream 426093 2057915 ~ 2058429 (-)
LOC110516567 LOC106595628 other downstream 531934 1916571 ~ 1953363 (-)
LOC110519742 LOC106595845 other downstream 821455 1661660 ~ 1673583 (-)
G216811 NA other upstream 251888 2736861 ~ 2738467 (-)
G216902 LOC106606079 other upstream 561032 3046005 ~ 3059744 (-)
G217261 NA other upstream 853213 3338186 ~ 3338580 (-)
G217459 NA other upstream 1201429 3686402 ~ 3689304 (-)
G218073 LOC106605488 other upstream 1954123 4439096 ~ 4440437 (-)

Expression


Co-expression Network