Gene
RNA
| Item | Value |
|---|---|
| gene id | G216433 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 2566375 ~ 2567018 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU246521 | True | 544 | lncRNA | 0.43 | 2 | 2566375 | 2567018 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944474 | NA | coding | upstream | 147243 | 2414471 ~ 2419132 (+) |
| abcb5 | LOC106574003 | coding | upstream | 282061 | 2258551 ~ 2284314 (+) |
| LOC110513668 | LOC106595161 | coding | upstream | 442471 | 2010277 ~ 2123904 (+) |
| ahr1a | LOC106605709 | coding | upstream | 578895 | 1960781 ~ 1987480 (+) |
| LOC118944758 | LOC100136727 | coding | upstream | 681469 | 1882585 ~ 1884906 (+) |
| fhod3b | fhod3 | coding | downstream | 39005 | 2606023 ~ 2853339 (+) |
| LOC110517892 | LOC106606083 | coding | downstream | 304394 | 2871412 ~ 2883602 (+) |
| LOC110520727 | LOC106606081 | coding | downstream | 357423 | 2924441 ~ 2943873 (+) |
| LOC110520728 | LOC106606086 | coding | downstream | 383347 | 2950365 ~ 2963921 (+) |
| LOC110506689 | LOC106606075 | coding | downstream | 421888 | 2988906 ~ 2992685 (+) |
| G216416 | NA | non-coding | upstream | 29337 | 2536689 ~ 2537038 (+) |
| G216362 | NA | non-coding | upstream | 81700 | 2484250 ~ 2484675 (+) |
| G216357 | LOC106605879 | non-coding | upstream | 82643 | 2477420 ~ 2483732 (+) |
| G216354 | NA | non-coding | upstream | 99060 | 2466698 ~ 2467315 (+) |
| G216277 | NA | non-coding | upstream | 185636 | 2380467 ~ 2380739 (+) |
| G216438 | NA | non-coding | downstream | 5377 | 2572395 ~ 2574899 (+) |
| G216487 | NA | non-coding | downstream | 43195 | 2610213 ~ 2610452 (+) |
| G216500 | NA | non-coding | downstream | 71586 | 2638604 ~ 2638941 (+) |
| G216506 | NA | non-coding | downstream | 81456 | 2648474 ~ 2648748 (+) |
| G216511 | NA | non-coding | downstream | 96168 | 2663186 ~ 2663488 (+) |
| G216353 | NA | other | upstream | 103631 | 2461217 ~ 2462744 (+) |
| G215843 | LOC100136727 | other | upstream | 761120 | 1804388 ~ 1805255 (+) |
| G215830 | NA | other | upstream | 819093 | 1670411 ~ 1747282 (+) |
| LOC118944469 | LOC100136727 | other | upstream | 886268 | 1635598 ~ 1680107 (+) |
| LOC110506718 | LOC102207154 | other | downstream | 450146 | 3017105 ~ 3022686 (+) |
| G216640 | LOC106606088 | other | downstream | 472968 | 3039986 ~ 3041517 (+) |
| G216673 | NA | other | downstream | 539336 | 3106354 ~ 3108233 (+) |
| G217146 | NA | other | downstream | 913298 | 3480316 ~ 3481536 (+) |
