G216464


Basic Information

Item Value
gene id G216464
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 2568097 ~ 2570484 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU246556
ACTCTATGGTATTGAAAGGTGAGTAATACATTAATCCAGTGAGATGTTGGGGGTTACGTTACTCTATGGTATTGACAGGTTAGTAATACATTCATTCAGTGAGATGTTGGGGGTTACGTTACTCTATGGTATTGAAAGGTGAGTAATACATTCATTCAGTGAGATGTTGGGGGTTACGTTACTCTATGGTATTGACAGGTGAGTAATACATTCATTCAGTGAGATGTTGGGGGTTACGTTACTCTGTGGTATTGACAGGTTAGTAATACATTCATTCAGTGAGATGTTGGGGGTTACGTTACTCTATGGTATTGACAGGTGAGTAATACATTCATTCAGTGAGATGTTGGGGGTTACGTTACTCTATGGTATTGACAGGTTAGTAATACATTAATCCAGTGAGATGTTGGGGGTTACGTTACTCTATGGTATTGACAGGTTAGTAATACATTCATTCAGTGAGATGTTGGGGGTTACGTTACTCTATGGTATTGACAGGTTAGTAATACATTCATTCAGTGAGATGTTGGGGGTTACGTTACTCTATGGTATTGACAGGTTAGTAATACATTCATTCAGTGAGATGTTGGGAGTTACGTTACTCTATGGTATTGACAGGTTAGTAATACATTCATTCAGTGAGATGTT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106600040, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246556 True 648 lncRNA 0.44 2 2568097 2570484

Neighbor

gene id symbol gene type direction distance location
LOC118964348 LOC106605991 coding downstream 14725 2546234 ~ 2553372 (-)
LOC118944776 LOC105018831 coding downstream 46187 2461163 ~ 2521910 (-)
LOC118944775 NA coding downstream 179798 2354283 ~ 2388299 (-)
sp8b LOC106573674 coding downstream 276091 2286294 ~ 2292006 (-)
LOC110506602 LOC106595809 coding downstream 318588 2243487 ~ 2249509 (-)
LOC110520772 LOC108270036 coding upstream 12756 2583240 ~ 2604766 (-)
LOC110517891 LOC106606082 coding upstream 285614 2856098 ~ 2869094 (-)
c4b c4 coding upstream 318587 2889071 ~ 2916355 (-)
LOC118964349 LOC106573444 coding upstream 393162 2963646 ~ 2988272 (-)
LOC110520729 LOC106606076 coding upstream 421740 2992224 ~ 2997425 (-)
G216411 NA non-coding downstream 43555 2524335 ~ 2524542 (-)
G216391 NA non-coding downstream 83124 2484522 ~ 2484973 (-)
G216390 NA non-coding downstream 84058 2483834 ~ 2484039 (-)
G216271 NA non-coding downstream 191329 2376533 ~ 2376768 (-)
G216757 NA non-coding upstream 58220 2628704 ~ 2628916 (-)
G216765 NA non-coding upstream 78433 2648917 ~ 2649344 (-)
G216767 NA non-coding upstream 83794 2654278 ~ 2654615 (-)
G216768 NA non-coding upstream 84719 2655203 ~ 2655421 (-)
G216775 NA non-coding upstream 94680 2665164 ~ 2665590 (-)
G216059 NA other downstream 442745 2124176 ~ 2125352 (-)
G216066 NA other downstream 446240 2121203 ~ 2121857 (-)
G216038 NA other downstream 509668 2057915 ~ 2058429 (-)
LOC110516567 LOC106595628 other downstream 615509 1916571 ~ 1953363 (-)
LOC110519742 LOC106595845 other downstream 905030 1661660 ~ 1673583 (-)
G216811 NA other upstream 166377 2736861 ~ 2738467 (-)
G216902 LOC106606079 other upstream 475521 3046005 ~ 3059744 (-)
G217261 NA other upstream 767702 3338186 ~ 3338580 (-)
G217459 NA other upstream 1115918 3686402 ~ 3689304 (-)
G218073 LOC106605488 other upstream 1868612 4439096 ~ 4440437 (-)

Expression


Co-expression Network