G216438


Basic Information

Item Value
gene id G216438
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 2572395 ~ 2574899 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU246526
ATCTAGTTCAACTGTTAAACCCCATCAGAATCCAACCATAATGGTTGAatctagttcaactgtcgtaccccatcagaatccAACCATAATGGTTGAatctagttcaactgtcatatcccatcagaaaccagccataatggttgaatctagttcaactgtcataccccatcagaatccAACCATAATGGTTGAatctagttcaactgtcgtaccccatcagaaaccaGCCATAAGGTTTGAatctagttcaactgtcataccccatcagaaaccagccataatggttgaatctagttcaactgtcgtaccccatcagaaaccaGCCATAAGGTTTGAatctagttcaactgtcgtaccccattagTATCCAGCCATAATGGTTGAatctagttcaactgtcgtaccccatcagaaaccaGCCATAAGGTCTGAatctagttcaactgtcatatcccatcagaaaccagccataatggttgaatctagttcaactgtcgtaccccatcagaatccAACCATAATGGTTGAatctagttcaactgtcgtaccccattagTATCCAGCCATAATGGTTGAatctagttcaactgtcgtaccccatcagaaaccagccataatggttgaatctagttcaactgtcatatcccatcagaaaccagccataatggttgaatctagttcaactgtcatatcccatcagaaaccagccataatggttgaatctagttcaactgtcgtaccccattagTATCCAGCCATAATGGTTGAatctagttcaactgtcatatcccatcagaaaccagccataatggttgaatctagttcaactgtcgtatcccatcagaaaccagccataatggttgaatctagttcaactgttgtaccccatcagaaaccagccataatggttgaatctagttcaactgtcgtaccccatcagaaaccagccataatggttgaatctagttcaactgtcatatccCATCAGAAACCAGCTATAATGGTTGAatctagttcaactgtcgtaccccatcagaatccAACCATAATGGTTGAatctagttcaactgtcgtaccccatcagaaaccaGCCATAAGGTTTGAatctagttcaactgtcgtaccccatcagaaTCCAGCCATAATGGTTGAatctagttcaactgtcataccccatcagaaaccaGCCATAAGGTTTGAatctagttcaactgtcgtaccccatcagaaaccaGCCATAATGGTTGAAtatagttcaactgtcgtaccccatcagaaaccagccataatggttgaatctagttcaactgtcatatcccatcagaaaccagccataatggttgaatctagttcaactgtcgtaccccatcagaatccAACCATAATGGTTGAatctagttcaactgtcgtaccccatcagaaaccagccataatggttgaatctagttcaactgtcgtaccccatcagaaaccagccataatggttgaatctagttcaactgtcgtaccccatcagaaaccaGCCATAAGGTTTGAatctagttcaactgtcgtaccccatcagaaaccaGCCATAATGTTTGAatctagttcaactgtcgtaccccatcagaaaccagccataatggttgaatctagttc
>TU246528
ATCTAGTTCAACTGTTAAACCCCATCAGAATCCAACCATAATGGTTGAatctagttcaactgtcgtaccccatcagaatccAACCATAATGGTTGAatctagttcaactgtcatatcccatcagaaaccagccataatggttgaatctagttcaactgtcataccccatcagaaaccagccataatggttgaatctagttcaactgtcgtaccccatcagaatccAACCATAATGGTTGAatctagttcaactgtcgtaccccatcagaaaccagccataatggttgaatctagttcaactgtcataccccatcagaaaccaGCCATAAGGTTTGAatctagttcaactgtcgtaccc

Function

NR:

description
PREDICTED: titin-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246526 False 1641 TUCP 0.42 2 2572395 2574899
TU246528 True 358 lncRNA 0.38 2 2572395 2574288

Neighbor

gene id symbol gene type direction distance location
LOC118944474 NA coding upstream 153263 2414471 ~ 2419132 (+)
abcb5 LOC106574003 coding upstream 288081 2258551 ~ 2284314 (+)
LOC110513668 LOC106595161 coding upstream 448491 2010277 ~ 2123904 (+)
ahr1a LOC106605709 coding upstream 584915 1960781 ~ 1987480 (+)
LOC118944758 LOC100136727 coding upstream 687489 1882585 ~ 1884906 (+)
fhod3b fhod3 coding downstream 31735 2606023 ~ 2853339 (+)
LOC110517892 LOC106606083 coding downstream 297124 2871412 ~ 2883602 (+)
LOC110520727 LOC106606081 coding downstream 350153 2924441 ~ 2943873 (+)
LOC110520728 LOC106606086 coding downstream 376077 2950365 ~ 2963921 (+)
LOC110506689 LOC106606075 coding downstream 414618 2988906 ~ 2992685 (+)
G216433 NA non-coding upstream 5377 2566375 ~ 2567018 (+)
G216416 NA non-coding upstream 35357 2536689 ~ 2537038 (+)
G216362 NA non-coding upstream 87720 2484250 ~ 2484675 (+)
G216357 LOC106605879 non-coding upstream 88663 2477420 ~ 2483732 (+)
G216354 NA non-coding upstream 105080 2466698 ~ 2467315 (+)
G216487 NA non-coding downstream 35925 2610213 ~ 2610452 (+)
G216500 NA non-coding downstream 64316 2638604 ~ 2638941 (+)
G216506 NA non-coding downstream 74186 2648474 ~ 2648748 (+)
G216511 NA non-coding downstream 88898 2663186 ~ 2663488 (+)
G216517 NA non-coding downstream 97498 2671786 ~ 2672025 (+)
G216353 NA other upstream 109651 2461217 ~ 2462744 (+)
G215843 LOC100136727 other upstream 767140 1804388 ~ 1805255 (+)
G215830 NA other upstream 825113 1670411 ~ 1747282 (+)
LOC118944469 LOC100136727 other upstream 892288 1635598 ~ 1680107 (+)
LOC110506718 LOC102207154 other downstream 442876 3017105 ~ 3022686 (+)
G216640 LOC106606088 other downstream 465698 3039986 ~ 3041517 (+)
G216673 NA other downstream 532066 3106354 ~ 3108233 (+)
G217146 NA other downstream 906028 3480316 ~ 3481536 (+)
LOC110520752 LOC106606080 other downstream 960889 3534519 ~ 3556267 (+)

Expression


Co-expression Network