G216500


Basic Information

Item Value
gene id G216500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 2638604 ~ 2638941 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU246604
gcttcgatgtggtggctgttgtcgttgtgttgctggttcgagcccagggaggagcgaggagagggacggaagctatactgttactcTGGCAATACttaagtgcctataagaacatccaatagtcaaaggttaatgaaaaacaaatggtatagagggaaatagtcctataataactacaatctaaaacttcttacctgggaatattgaagactcatgttaaaaggaaccaccagctttcatatgttctgagcaaggaactgaaacgttagctttcttacatagcacatattgcacttttacgttcttctccaacactttgtttttgcattatttaaacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246604 True 338 lncRNA 0.40 1 2638604 2638941

Neighbor

gene id symbol gene type direction distance location
LOC118944474 NA coding upstream 219472 2414471 ~ 2419132 (+)
abcb5 LOC106574003 coding upstream 354290 2258551 ~ 2284314 (+)
LOC110513668 LOC106595161 coding upstream 514700 2010277 ~ 2123904 (+)
ahr1a LOC106605709 coding upstream 651124 1960781 ~ 1987480 (+)
LOC118944758 LOC100136727 coding upstream 753698 1882585 ~ 1884906 (+)
LOC110517892 LOC106606083 coding downstream 232471 2871412 ~ 2883602 (+)
LOC110520727 LOC106606081 coding downstream 285500 2924441 ~ 2943873 (+)
LOC110520728 LOC106606086 coding downstream 311424 2950365 ~ 2963921 (+)
LOC110506689 LOC106606075 coding downstream 349965 2988906 ~ 2992685 (+)
LOC110506694 aif1 coding downstream 359052 2997993 ~ 3004668 (+)
G216487 NA non-coding upstream 28152 2610213 ~ 2610452 (+)
G216438 NA non-coding upstream 64316 2572395 ~ 2574899 (+)
G216433 NA non-coding upstream 71586 2566375 ~ 2567018 (+)
G216416 NA non-coding upstream 101566 2536689 ~ 2537038 (+)
G216362 NA non-coding upstream 153929 2484250 ~ 2484675 (+)
G216506 NA non-coding downstream 9533 2648474 ~ 2648748 (+)
G216511 NA non-coding downstream 24245 2663186 ~ 2663488 (+)
G216517 NA non-coding downstream 32845 2671786 ~ 2672025 (+)
G216520 NA non-coding downstream 34980 2673921 ~ 2674503 (+)
G216539 NA non-coding downstream 69524 2708465 ~ 2708668 (+)
G216353 NA other upstream 175860 2461217 ~ 2462744 (+)
G215843 LOC100136727 other upstream 833349 1804388 ~ 1805255 (+)
G215830 NA other upstream 891322 1670411 ~ 1747282 (+)
LOC110506718 LOC102207154 other downstream 378223 3017105 ~ 3022686 (+)
G216640 LOC106606088 other downstream 401045 3039986 ~ 3041517 (+)
G216673 NA other downstream 467413 3106354 ~ 3108233 (+)
G217146 NA other downstream 841375 3480316 ~ 3481536 (+)
LOC110520752 LOC106606080 other downstream 896236 3534519 ~ 3556267 (+)

Expression


Co-expression Network