Gene
RNA
| Item | Value |
|---|---|
| gene id | G216790 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 2689890 ~ 2690100 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger BED domain-containing protein 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU246974 | True | 211 | lncRNA | 0.39 | 1 | 2689890 | 2690100 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520772 | LOC108270036 | coding | downstream | 85124 | 2583240 ~ 2604766 (-) |
| LOC110519055 | LOC106606020 | coding | downstream | 108450 | 2567040 ~ 2581440 (-) |
| LOC118964348 | LOC106605991 | coding | downstream | 136518 | 2546234 ~ 2553372 (-) |
| LOC118944776 | LOC105018831 | coding | downstream | 167980 | 2461163 ~ 2521910 (-) |
| LOC118944775 | NA | coding | downstream | 301591 | 2354283 ~ 2388299 (-) |
| LOC110517891 | LOC106606082 | coding | upstream | 165998 | 2856098 ~ 2869094 (-) |
| c4b | c4 | coding | upstream | 198971 | 2889071 ~ 2916355 (-) |
| LOC118964349 | LOC106573444 | coding | upstream | 273546 | 2963646 ~ 2988272 (-) |
| LOC110520729 | LOC106606076 | coding | upstream | 302124 | 2992224 ~ 2997425 (-) |
| LOC110506699 | LOC106606088 | coding | upstream | 332708 | 3022808 ~ 3058765 (-) |
| G216787 | NA | non-coding | downstream | 6199 | 2683479 ~ 2683691 (-) |
| G216782 | NA | non-coding | downstream | 14902 | 2674667 ~ 2674988 (-) |
| G216780 | NA | non-coding | downstream | 17910 | 2671756 ~ 2671980 (-) |
| G216775 | NA | non-coding | downstream | 24300 | 2665164 ~ 2665590 (-) |
| G216768 | NA | non-coding | downstream | 34469 | 2655203 ~ 2655421 (-) |
| G216800 | NA | non-coding | upstream | 21287 | 2711387 ~ 2711718 (-) |
| G216801 | NA | non-coding | upstream | 22633 | 2712733 ~ 2713045 (-) |
| G216807 | NA | non-coding | upstream | 40061 | 2730161 ~ 2730477 (-) |
| G216808 | NA | non-coding | upstream | 40924 | 2731024 ~ 2731820 (-) |
| G216810 | NA | non-coding | upstream | 45434 | 2735534 ~ 2735765 (-) |
| G216059 | NA | other | downstream | 564538 | 2124176 ~ 2125352 (-) |
| G216066 | NA | other | downstream | 568033 | 2121203 ~ 2121857 (-) |
| G216038 | NA | other | downstream | 631461 | 2057915 ~ 2058429 (-) |
| LOC110516567 | LOC106595628 | other | downstream | 737302 | 1916571 ~ 1953363 (-) |
| LOC110519742 | LOC106595845 | other | downstream | 1026823 | 1661660 ~ 1673583 (-) |
| G216811 | NA | other | upstream | 46761 | 2736861 ~ 2738467 (-) |
| G216902 | LOC106606079 | other | upstream | 355905 | 3046005 ~ 3059744 (-) |
| G217261 | NA | other | upstream | 648086 | 3338186 ~ 3338580 (-) |
| G217459 | NA | other | upstream | 996302 | 3686402 ~ 3689304 (-) |
| G218073 | LOC106605488 | other | upstream | 1748996 | 4439096 ~ 4440437 (-) |
