Gene
RNA
| Item | Value |
|---|---|
| gene id | G216539 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 2708465 ~ 2708668 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU246646 | True | 204 | lncRNA | 0.44 | 1 | 2708465 | 2708668 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944474 | NA | coding | upstream | 289333 | 2414471 ~ 2419132 (+) |
| abcb5 | LOC106574003 | coding | upstream | 424151 | 2258551 ~ 2284314 (+) |
| LOC110513668 | LOC106595161 | coding | upstream | 584561 | 2010277 ~ 2123904 (+) |
| ahr1a | LOC106605709 | coding | upstream | 720985 | 1960781 ~ 1987480 (+) |
| LOC118944758 | LOC100136727 | coding | upstream | 823559 | 1882585 ~ 1884906 (+) |
| LOC110517892 | LOC106606083 | coding | downstream | 162744 | 2871412 ~ 2883602 (+) |
| LOC110520727 | LOC106606081 | coding | downstream | 215773 | 2924441 ~ 2943873 (+) |
| LOC110520728 | LOC106606086 | coding | downstream | 241697 | 2950365 ~ 2963921 (+) |
| LOC110506689 | LOC106606075 | coding | downstream | 280238 | 2988906 ~ 2992685 (+) |
| LOC110506694 | aif1 | coding | downstream | 289325 | 2997993 ~ 3004668 (+) |
| G216520 | NA | non-coding | upstream | 33962 | 2673921 ~ 2674503 (+) |
| G216517 | NA | non-coding | upstream | 36440 | 2671786 ~ 2672025 (+) |
| G216511 | NA | non-coding | upstream | 44977 | 2663186 ~ 2663488 (+) |
| G216506 | NA | non-coding | upstream | 59717 | 2648474 ~ 2648748 (+) |
| G216500 | NA | non-coding | upstream | 69524 | 2638604 ~ 2638941 (+) |
| G216542 | NA | non-coding | downstream | 3971 | 2712639 ~ 2712910 (+) |
| G216543 | NA | non-coding | downstream | 4359 | 2713027 ~ 2713244 (+) |
| G216549 | NA | non-coding | downstream | 8501 | 2717169 ~ 2717463 (+) |
| G216550 | NA | non-coding | downstream | 9015 | 2717683 ~ 2719298 (+) |
| G216564 | NA | non-coding | downstream | 37146 | 2745814 ~ 2746166 (+) |
| G216438 | NA | other | upstream | 133566 | 2572395 ~ 2574899 (+) |
| G216353 | NA | other | upstream | 245721 | 2461217 ~ 2462744 (+) |
| G215843 | LOC100136727 | other | upstream | 903210 | 1804388 ~ 1805255 (+) |
| G215830 | NA | other | upstream | 961183 | 1670411 ~ 1747282 (+) |
| LOC110506718 | LOC102207154 | other | downstream | 308496 | 3017105 ~ 3022686 (+) |
| G216640 | LOC106606088 | other | downstream | 331318 | 3039986 ~ 3041517 (+) |
| G216673 | NA | other | downstream | 397686 | 3106354 ~ 3108233 (+) |
| G217146 | NA | other | downstream | 771648 | 3480316 ~ 3481536 (+) |
| LOC110520752 | LOC106606080 | other | downstream | 826509 | 3534519 ~ 3556267 (+) |
