G216549


Basic Information

Item Value
gene id G216549
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 2717169 ~ 2717463 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU246656
AGACAATCTGGAGCAGATTGTGTGGTCGGGGTGTGAGACTTTGAAAATAAATCCACAATTCCACCATGAATGCAGTCAGTACAGTGATCAGAGTTGAATTATATCACTACTTTTCCAGCCAGGCTTCAAATCAAACCTTTCTCCATAACTAGACTTACGTTTTCTACATGTACTTATATTTGAGCTTTATTGTGTTCACTGAGAGGCCTTATGCCCCCTGTAATGGAAATCTTTAAACCTCCCCAATATGAATGTGTTGTCCTGTATGTGCGGTTAGTTAGTCATCATACCGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246656 True 295 lncRNA 0.40 1 2717169 2717463

Neighbor

gene id symbol gene type direction distance location
LOC118944474 NA coding upstream 298037 2414471 ~ 2419132 (+)
abcb5 LOC106574003 coding upstream 432855 2258551 ~ 2284314 (+)
LOC110513668 LOC106595161 coding upstream 593265 2010277 ~ 2123904 (+)
ahr1a LOC106605709 coding upstream 729689 1960781 ~ 1987480 (+)
LOC118944758 LOC100136727 coding upstream 832263 1882585 ~ 1884906 (+)
LOC110517892 LOC106606083 coding downstream 153949 2871412 ~ 2883602 (+)
LOC110520727 LOC106606081 coding downstream 206978 2924441 ~ 2943873 (+)
LOC110520728 LOC106606086 coding downstream 232902 2950365 ~ 2963921 (+)
LOC110506689 LOC106606075 coding downstream 271443 2988906 ~ 2992685 (+)
LOC110506694 aif1 coding downstream 280530 2997993 ~ 3004668 (+)
G216543 NA non-coding upstream 3925 2713027 ~ 2713244 (+)
G216542 NA non-coding upstream 4259 2712639 ~ 2712910 (+)
G216539 NA non-coding upstream 8501 2708465 ~ 2708668 (+)
G216520 NA non-coding upstream 42666 2673921 ~ 2674503 (+)
G216517 NA non-coding upstream 45144 2671786 ~ 2672025 (+)
G216550 NA non-coding downstream 220 2717683 ~ 2719298 (+)
G216564 NA non-coding downstream 28351 2745814 ~ 2746166 (+)
G216571 NA non-coding downstream 55017 2772480 ~ 2775679 (+)
G216478 NA non-coding downstream 59904 2777367 ~ 2856715 (+)
G216591 NA non-coding downstream 102163 2819626 ~ 2820029 (+)
G216438 NA other upstream 142270 2572395 ~ 2574899 (+)
G216353 NA other upstream 254425 2461217 ~ 2462744 (+)
G215843 LOC100136727 other upstream 911914 1804388 ~ 1805255 (+)
G215830 NA other upstream 969887 1670411 ~ 1747282 (+)
LOC110506718 LOC102207154 other downstream 299701 3017105 ~ 3022686 (+)
G216640 LOC106606088 other downstream 322523 3039986 ~ 3041517 (+)
G216673 NA other downstream 388891 3106354 ~ 3108233 (+)
G217146 NA other downstream 762853 3480316 ~ 3481536 (+)
LOC110520752 LOC106606080 other downstream 817714 3534519 ~ 3556267 (+)

Expression


Co-expression Network