G216808


Basic Information

Item Value
gene id G216808
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 2731024 ~ 2731820 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU246993
ttagtccaccAGTTGCAAATTAgaatttctattggacaaattcaggtatgtttatccccgtttaagaaacgtttgtCAACAAAATCGCCGATataaatacacccctgatcacacgcaaacacagttcactttcatagtagccacataaaaacagcatgaACACCTTGCTCATTGTATATATAATTCTTTCTCGCTACTATCTACACGCTCTCCTcctcgcttgtggacttcagtgcacaacacatcagctgtctgtgagcAAGCGataaaaactttccaagccaaacataTCATGACcgctaactgctacacacagcctacatcactGTCACTCATTGCCAACatactagaactaacgcgttagtaaacccgctctaatcatgcagtacagtcagAAAGCTTAGCAGTTACACTGAcggccccagtggcaataaatgaataaaaccaaaagcttaccttgacttggaagagttccagtgttgcatagccatagccagctatctaacatagcatccctctctgtttcatagccaactagctaacatagcatccctctctgtttcatagccaactagctaacatagcatccctctctgtttcatagccagctatctaacatagcatccctctctgtttcatagccagctagttaacatagcatccctctctgtttcataGTCAACTagttaacatagcatccctctctgtttcataGCCAACTagttaacatagcatccctctctgtttcataGCCAACTAGtcaacatagcatccctctctgtttcatagccaactag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246993 True 797 lncRNA 0.41 1 2731024 2731820

Neighbor

gene id symbol gene type direction distance location
LOC110520772 LOC108270036 coding downstream 126258 2583240 ~ 2604766 (-)
LOC110519055 LOC106606020 coding downstream 149584 2567040 ~ 2581440 (-)
LOC118964348 LOC106605991 coding downstream 177652 2546234 ~ 2553372 (-)
LOC118944776 LOC105018831 coding downstream 209114 2461163 ~ 2521910 (-)
LOC118944775 NA coding downstream 342725 2354283 ~ 2388299 (-)
LOC110517891 LOC106606082 coding upstream 124278 2856098 ~ 2869094 (-)
c4b c4 coding upstream 157251 2889071 ~ 2916355 (-)
LOC118964349 LOC106573444 coding upstream 231826 2963646 ~ 2988272 (-)
LOC110520729 LOC106606076 coding upstream 260404 2992224 ~ 2997425 (-)
LOC110506699 LOC106606088 coding upstream 290988 3022808 ~ 3058765 (-)
G216807 NA non-coding downstream 547 2730161 ~ 2730477 (-)
G216801 NA non-coding downstream 17979 2712733 ~ 2713045 (-)
G216800 NA non-coding downstream 19306 2711387 ~ 2711718 (-)
G216790 NA non-coding downstream 40924 2689890 ~ 2690100 (-)
G216787 NA non-coding downstream 47333 2683479 ~ 2683691 (-)
G216810 NA non-coding upstream 3714 2735534 ~ 2735765 (-)
G216814 NA non-coding upstream 33255 2765075 ~ 2765934 (-)
G216819 NA non-coding upstream 40670 2772490 ~ 2775298 (-)
G216837 fhod3 non-coding upstream 78177 2809997 ~ 2813669 (-)
G216859 NA non-coding upstream 117411 2849231 ~ 2853337 (-)
G216059 NA other downstream 605672 2124176 ~ 2125352 (-)
G216066 NA other downstream 609167 2121203 ~ 2121857 (-)
G216038 NA other downstream 672595 2057915 ~ 2058429 (-)
LOC110516567 LOC106595628 other downstream 778436 1916571 ~ 1953363 (-)
LOC110519742 LOC106595845 other downstream 1067957 1661660 ~ 1673583 (-)
G216811 NA other upstream 5041 2736861 ~ 2738467 (-)
G216902 LOC106606079 other upstream 314185 3046005 ~ 3059744 (-)
G217261 NA other upstream 606366 3338186 ~ 3338580 (-)
G217459 NA other upstream 954582 3686402 ~ 3689304 (-)
G218073 LOC106605488 other upstream 1707276 4439096 ~ 4440437 (-)

Expression


Co-expression Network