XLOC_021775 (dnajc11a)


Basic Information

Item Value
gene id XLOC_021775
gene name dnajc11a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 30707837 ~ 30724909 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043200
GTTGGGGGCGGGGATGAAAGGTGGTAAATATGGCGGCGGCCTTGGAGGAAGATGAAATTGACAATGATGACTATTATTCTCTGTTAAACGTCCGCAGAGAGGCCACACAGGAAGAGCTCAAGGCTTCATATCGCCGTCTTTGCATGCTGTACCACCCAGACAAGCACAGAGATCCAGAGCTCAAGAAACAGGCAGAGCAGCTTTTTAACTTGGTCCACCAAGCATACGAAGTGCTTAGCGACCCTCAAGCTAGAGCAATTTATGACATATATGGGAAGAAAGGGTTGGATGTTGAAGGATGGGAGgTAGTGGAGAGGAAAAGAACACCAGCAGAGATTCGTGAAGAGTATGAGCGActtcaaagagagagagaggagagaagaCTACAGCAAAGGACCAACCCTAAGGGGACAATAAGTGTGGGCATTGATGCGACAGACCTCTTTGATTACTATGAGGAGGATTATGATGAGATCTCTGGTGGTGGCGGAGGTGGAGGTTTACCGCACATTGAGATCAACAAGATGCACATATCCCAGTCCATAGAGGCCCCTCTGACCACTTCAGACACGGCAGTTCTTTCTGGCTCTCTCTCCACACACAATGGCAATGGAGGAGGAAACATAAGCTTGGCCTTGCGACGCGTCACCTCGGCTAAAGGCTGGGGAGAGGTTGAGTTTGGGGCAGGAGACACACATGGCCCTCTCTTCGGCCTAAAGATTTTCCGTAACCTGACTTCACGCTGCTTCACAACAGCTCATTGTGGCTTGCAGTTTTCATCGCGTGGCATACGGCCGGGTCTCACTACTATGCTTGCACGTCACCTAGACAAAAACACTATGGGTTATTTACAGTGGCGCTGGGGAACTCAGTCTTCCATGAACACCAGCATCGTGAGGGACACCAAAAGCAGCCATTTCACATTTGCTGTGCAGTTGGGAATTCCACATACATTTATCATGATGAGCTACCAGTACAAATTCCAGGATGATGATCAGACCAAGATCAAGGGCTCTGTCAAGTCAGGGTTTTTCGGCACTGTGGTGGAATATGGTGCTGAGACTAAAATCAGTCGGCACAGTGTCCTGGGCGCCACCGTCAGCATTGGAGTACCTCAGGGCGTTTCGCTCAAGATCAAGCTGAACCGAGCGAGTCAGACGTACTTCTTCCCCATCCACTTAACAGAGCAGCTTCTTCCCAGCGCTGTGTTTTATGCCACCGTCGGACCCCTCGTGTTCTACTTGGCCATCCAGCGACTGGTTATCAAACCTTATGTTCGTGCTCAGCAGGAACAGGAGCTGGAGAAGCAGCGGGAGAGTTCGGCGTCAGACGTTGCCAAGAAGAAGCAAGAGGCAGAAGCAGCTGTTCTGCTGATGCAGGAGTCTGTGCGCAGAATTATCGAAGCAGAGGAGTCTAAGATGGgtCTGATCATCCTCAATGCCTGGTATGGCAAGTTTGTGACGGACAACAGCCGTAAGCATGAAAGGGCAAGGGTCATTGATGTGACAGTGCCTCTACAGTGTCTGGTGAAGGACTCTAAGCTCATGCTCACAGAAGCATCTAAGGCTGGATTACCGGGCTTCTATGACCCCTGCGTGGGTGAGGAGAAGAGTCTGAAGGTGCTCTATCAGTTCAGAGGTGTGATGCACCAAGTTCTATGTGGTGACACAGAAGCACTCAGGATACCAAAACAATCCCACAGGATTGATAATGACACCTAGGAACATGTATCTCTTGAGCTGAATGGGGGACAGCTTGGACTGGTATAGACTGATGAGACAGAGTAGTGCCCTGGAAACACTCTGTGCCCTTAGAAGTCTTCATATACCTATTTATCCTTTATTTTGTGCTCTTTTAAATACTATTCTTCACAATGTCTGTTTCGCAAAGTAGAACATTTGCATTGGAACGTTTAATTTGCTGGATTTCCACtaataaaatgatgacctttgcCAGAAAAACCAgacaacataaatatataattttttgcgTTGGCAGGcctttaaacctttttaaaacagAGGCCCTCTTCCTGAAATATGGATCCACAACAGTGCCTGTAATCAGAATTTACCAGAGAGAGCTATTTTATCCTCATTACATCACTGAGAAACCATTGCTGCTTGATCCGATTCACTGAATCCCGCAGGAGCTGGCGAATCCCAGTTGTCAGCCTACTTTCTATGACTGACTTTTTGTACCACCAGTTTCCCAATAAACGATCTTGCAATTATTTAGGAGGAAAAGCATGTCCTTAGTGATaatcatttacattatttttctcCTCGATCACATTATTTTGGCTGTAAGAATTGACAATATGCAGGTACTGTTAGCGTGTGGTTGTTGAGGAAAGAGAGTGTGAACTGTGTGCTAAATCTCATGTAGGACTAGCCTCCCACCTTGTGTCCAAAGACTTGAATAGCAGTGGATGAAGGGAAAGTAATGGAACTTGTATTTTGGGTTTGATGTCCTTTACTCCCTTCATTCTAGTGCCATAATTCATACAGGGAACATCTACATCCCCATTCAATCTTCTTTCAGGTTGATTTAACTATTTGTTGCCTTTTTGGTGTTTGAGGACTTTATGCAAGTACTTTAATTTCTGTTTTGATTTATCTTATATTTGAAAGACTGTATGGAATGTCTTTTTTTGTGGAGGAGGGCGGtcataatttatttgaaatgtgtCCATTCTGCACACTTGCCAGTTGAATGATGTTAAAACAACAATCTATAACTGTTGACTGGAGTATTGGTTTGTTCAAAGGAGTTGATTGTTAAATTTCACCCAATGGCCATTTGCAGCAGGTATAGACTGCAAAAAATCATCGCTTTTAAAATAAATCGTTaaagaaacaatggaaataaatattgattttgaATGGGGTA

Function

symbol description
dnajc11a Predicted to be involved in cristae formation. Orthologous to human DNAJC11 (DnaJ heat shock protein family (Hsp40) member C11).

GO:

id name namespace
GO:0042407 cristae formation biological_process
GO:0061617 MICOS complex cellular_component
GO:0005739 mitochondrion cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-1673 Predicted to be involved in cristae formation. Orthologous to human DNAJC11 (DnaJ heat shock protein family (Hsp40) member C11).

Ensembl:

ensembl_id ENSDARG00000011196

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043200 True 2892 mRNA 0.45 16 30707837 30724909

Neighbor

gene id symbol gene type direction distance location
XLOC_021774 NA coding upstream 274452 30402314 ~ 30433385 (+)
XLOC_021773 uts2a coding upstream 652118 30048849 ~ 30055719 (+)
XLOC_021772 tnfrsf9a coding upstream 697795 30006206 ~ 30010042 (+)
XLOC_021771 dvl1a coding upstream 715379 29966466 ~ 29992458 (+)
XLOC_021770 si:ch73-236e11.2 coding upstream 769636 29908348 ~ 29938201 (+)
XLOC_021776 asxl1 coding downstream 5212 30730121 ~ 30752553 (+)
XLOC_021777 AL845357.1 coding downstream 39378 30764287 ~ 30772886 (+)
XLOC_021778 npbwr2a coding downstream 103050 30827959 ~ 30845859 (+)
XLOC_021779 XKR7 coding downstream 134177 30859086 ~ 30890850 (+)
XLOC_021780 cables2a coding downstream 173104 30898013 ~ 30919307 (+)
XLOC_021767 NA non-coding upstream 860958 29840859 ~ 29846879 (+)
XLOC_021766 BX571850.1 non-coding upstream 1119279 29588444 ~ 29588558 (+)
XLOC_021765 NA non-coding upstream 1124558 29580543 ~ 29583279 (+)
XLOC_021763 NA non-coding upstream 1305741 29396181 ~ 29402096 (+)
XLOC_021782 BX649257.1 non-coding downstream 254476 30979385 ~ 30979499 (+)
XLOC_021785 NA non-coding downstream 353655 31078564 ~ 31085951 (+)
XLOC_021790 CR759830.1 non-coding downstream 708364 31433273 ~ 31433348 (+)
XLOC_021791 CR759830.2 non-coding downstream 708670 31433579 ~ 31433663 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_12486765_12495297 DCJ11, DNAJC11A, DNAJC11 coding CI01000001 null 12485546 ~ 12495518 (+)