Gene
RNA
| Item | Value |
|---|---|
| gene id | G216478 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 2777367 ~ 2856715 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU246571 | True | 540 | lncRNA | 0.37 | 2 | 2777367 | 2856715 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944474 | NA | coding | upstream | 358235 | 2414471 ~ 2419132 (+) |
| abcb5 | LOC106574003 | coding | upstream | 493053 | 2258551 ~ 2284314 (+) |
| LOC110513668 | LOC106595161 | coding | upstream | 653463 | 2010277 ~ 2123904 (+) |
| ahr1a | LOC106605709 | coding | upstream | 789887 | 1960781 ~ 1987480 (+) |
| LOC118944758 | LOC100136727 | coding | upstream | 892461 | 1882585 ~ 1884906 (+) |
| LOC110517892 | LOC106606083 | coding | downstream | 14697 | 2871412 ~ 2883602 (+) |
| LOC110520727 | LOC106606081 | coding | downstream | 67726 | 2924441 ~ 2943873 (+) |
| LOC110520728 | LOC106606086 | coding | downstream | 93650 | 2950365 ~ 2963921 (+) |
| LOC110506689 | LOC106606075 | coding | downstream | 132191 | 2988906 ~ 2992685 (+) |
| LOC110506694 | aif1 | coding | downstream | 141278 | 2997993 ~ 3004668 (+) |
| G216571 | NA | non-coding | upstream | 1688 | 2772480 ~ 2775679 (+) |
| G216564 | NA | non-coding | upstream | 31201 | 2745814 ~ 2746166 (+) |
| G216550 | NA | non-coding | upstream | 58069 | 2717683 ~ 2719298 (+) |
| G216549 | NA | non-coding | upstream | 59904 | 2717169 ~ 2717463 (+) |
| G216543 | NA | non-coding | upstream | 64123 | 2713027 ~ 2713244 (+) |
| G216479 | NA | non-coding | downstream | 32342 | 2889057 ~ 2901408 (+) |
| G216602 | NA | non-coding | downstream | 50369 | 2907084 ~ 2981672 (+) |
| G216609 | NA | non-coding | downstream | 103466 | 2960181 ~ 2961034 (+) |
| G216613 | NA | non-coding | downstream | 118962 | 2975677 ~ 2976047 (+) |
| G216615 | NA | non-coding | downstream | 122155 | 2978870 ~ 2980552 (+) |
| G216438 | NA | other | upstream | 202468 | 2572395 ~ 2574899 (+) |
| G216353 | NA | other | upstream | 314623 | 2461217 ~ 2462744 (+) |
| G215843 | LOC100136727 | other | upstream | 972112 | 1804388 ~ 1805255 (+) |
| G215830 | NA | other | upstream | 1030085 | 1670411 ~ 1747282 (+) |
| LOC110506718 | LOC102207154 | other | downstream | 160449 | 3017105 ~ 3022686 (+) |
| G216640 | LOC106606088 | other | downstream | 183271 | 3039986 ~ 3041517 (+) |
| G216673 | NA | other | downstream | 249639 | 3106354 ~ 3108233 (+) |
| G217146 | NA | other | downstream | 623601 | 3480316 ~ 3481536 (+) |
| LOC110520752 | LOC106606080 | other | downstream | 678462 | 3534519 ~ 3556267 (+) |
