Gene
RNA
| Item | Value |
|---|---|
| gene id | G216837 |
| gene name | fhod3 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 2809997 ~ 2813669 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| fhod3 | Predicted to enable actin filament binding activity. Predicted to be involved in actin cytoskeleton organization. Predicted to act upstream of or within negative regulation of actin filament polymerization. Predicted to be located in sarcomere. Predicted to be active in cytoplasm and cytoskeleton. Implicated in hypertrophic cardiomyopathy. |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU247022 | True | 374 | lncRNA | 0.32 | 2 | 2809997 | 2813669 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520772 | LOC108270036 | coding | downstream | 205231 | 2583240 ~ 2604766 (-) |
| LOC110519055 | LOC106606020 | coding | downstream | 228557 | 2567040 ~ 2581440 (-) |
| LOC118964348 | LOC106605991 | coding | downstream | 256625 | 2546234 ~ 2553372 (-) |
| LOC118944776 | LOC105018831 | coding | downstream | 288087 | 2461163 ~ 2521910 (-) |
| LOC118944775 | NA | coding | downstream | 421698 | 2354283 ~ 2388299 (-) |
| LOC110517891 | LOC106606082 | coding | upstream | 42429 | 2856098 ~ 2869094 (-) |
| c4b | c4 | coding | upstream | 75402 | 2889071 ~ 2916355 (-) |
| LOC118964349 | LOC106573444 | coding | upstream | 149977 | 2963646 ~ 2988272 (-) |
| LOC110520729 | LOC106606076 | coding | upstream | 178555 | 2992224 ~ 2997425 (-) |
| LOC110506699 | LOC106606088 | coding | upstream | 209139 | 3022808 ~ 3058765 (-) |
| G216819 | NA | non-coding | downstream | 34699 | 2772490 ~ 2775298 (-) |
| G216814 | NA | non-coding | downstream | 44063 | 2765075 ~ 2765934 (-) |
| G216810 | NA | non-coding | downstream | 74232 | 2735534 ~ 2735765 (-) |
| G216808 | NA | non-coding | downstream | 78177 | 2731024 ~ 2731820 (-) |
| G216807 | NA | non-coding | downstream | 79520 | 2730161 ~ 2730477 (-) |
| G216859 | NA | non-coding | upstream | 35562 | 2849231 ~ 2853337 (-) |
| G216868 | LOC106605921 | non-coding | upstream | 61521 | 2875190 ~ 2886434 (-) |
| G216871 | NA | non-coding | upstream | 93643 | 2907312 ~ 2981783 (-) |
| G216874 | NA | non-coding | upstream | 105110 | 2918779 ~ 2921114 (-) |
| G216877 | LOC106606081 | non-coding | upstream | 115430 | 2929099 ~ 2931363 (-) |
| G216811 | NA | other | downstream | 71530 | 2736861 ~ 2738467 (-) |
| G216059 | NA | other | downstream | 684645 | 2124176 ~ 2125352 (-) |
| G216066 | NA | other | downstream | 688140 | 2121203 ~ 2121857 (-) |
| G216038 | NA | other | downstream | 751568 | 2057915 ~ 2058429 (-) |
| LOC110516567 | LOC106595628 | other | downstream | 857409 | 1916571 ~ 1953363 (-) |
| G216902 | LOC106606079 | other | upstream | 232336 | 3046005 ~ 3059744 (-) |
| G217261 | NA | other | upstream | 524517 | 3338186 ~ 3338580 (-) |
| G217459 | NA | other | upstream | 872733 | 3686402 ~ 3689304 (-) |
| G218073 | LOC106605488 | other | upstream | 1625427 | 4439096 ~ 4440437 (-) |
| LOC118944829 | LOC106606066 | other | upstream | 1724993 | 4535483 ~ 4553394 (-) |
