Gene
RNA
| Item | Value |
|---|---|
| gene id | G216598 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 2840038 ~ 2843675 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU246712 | True | 232 | lncRNA | 0.39 | 2 | 2840038 | 2843675 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944474 | NA | coding | upstream | 420906 | 2414471 ~ 2419132 (+) |
| abcb5 | LOC106574003 | coding | upstream | 555724 | 2258551 ~ 2284314 (+) |
| LOC110513668 | LOC106595161 | coding | upstream | 716134 | 2010277 ~ 2123904 (+) |
| ahr1a | LOC106605709 | coding | upstream | 852558 | 1960781 ~ 1987480 (+) |
| LOC118944758 | LOC100136727 | coding | upstream | 955132 | 1882585 ~ 1884906 (+) |
| LOC110517892 | LOC106606083 | coding | downstream | 27737 | 2871412 ~ 2883602 (+) |
| LOC110520727 | LOC106606081 | coding | downstream | 80766 | 2924441 ~ 2943873 (+) |
| LOC110520728 | LOC106606086 | coding | downstream | 106690 | 2950365 ~ 2963921 (+) |
| LOC110506689 | LOC106606075 | coding | downstream | 145231 | 2988906 ~ 2992685 (+) |
| LOC110506694 | aif1 | coding | downstream | 154318 | 2997993 ~ 3004668 (+) |
| G216591 | NA | non-coding | upstream | 20009 | 2819626 ~ 2820029 (+) |
| G216571 | NA | non-coding | upstream | 64359 | 2772480 ~ 2775679 (+) |
| G216564 | NA | non-coding | upstream | 93872 | 2745814 ~ 2746166 (+) |
| G216550 | NA | non-coding | upstream | 120740 | 2717683 ~ 2719298 (+) |
| G216549 | NA | non-coding | upstream | 122575 | 2717169 ~ 2717463 (+) |
| G216479 | NA | non-coding | downstream | 45382 | 2889057 ~ 2901408 (+) |
| G216602 | NA | non-coding | downstream | 63409 | 2907084 ~ 2981672 (+) |
| G216609 | NA | non-coding | downstream | 116506 | 2960181 ~ 2961034 (+) |
| G216613 | NA | non-coding | downstream | 132002 | 2975677 ~ 2976047 (+) |
| G216615 | NA | non-coding | downstream | 135195 | 2978870 ~ 2980552 (+) |
| G216438 | NA | other | upstream | 265139 | 2572395 ~ 2574899 (+) |
| G216353 | NA | other | upstream | 377294 | 2461217 ~ 2462744 (+) |
| G215843 | LOC100136727 | other | upstream | 1034783 | 1804388 ~ 1805255 (+) |
| G215830 | NA | other | upstream | 1092756 | 1670411 ~ 1747282 (+) |
| LOC110506718 | LOC102207154 | other | downstream | 173489 | 3017105 ~ 3022686 (+) |
| G216640 | LOC106606088 | other | downstream | 196311 | 3039986 ~ 3041517 (+) |
| G216673 | NA | other | downstream | 262679 | 3106354 ~ 3108233 (+) |
| G217146 | NA | other | downstream | 636641 | 3480316 ~ 3481536 (+) |
| LOC110520752 | LOC106606080 | other | downstream | 691502 | 3534519 ~ 3556267 (+) |
