Gene
RNA
| Item | Value |
|---|---|
| gene id | G216615 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 2978870 ~ 2980552 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU246738 | False | 737 | lncRNA | 0.36 | 2 | 2978870 | 2980492 |
| TU246739 | True | 327 | lncRNA | 0.35 | 2 | 2978870 | 2980552 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520728 | LOC106606086 | coding | upstream | 14949 | 2950365 ~ 2963921 (+) |
| LOC110520727 | LOC106606081 | coding | upstream | 34997 | 2924441 ~ 2943873 (+) |
| LOC110517892 | LOC106606083 | coding | upstream | 95268 | 2871412 ~ 2883602 (+) |
| fhod3b | fhod3 | coding | upstream | 125531 | 2606023 ~ 2853339 (+) |
| LOC118944474 | NA | coding | upstream | 559738 | 2414471 ~ 2419132 (+) |
| LOC110506689 | LOC106606075 | coding | downstream | 8354 | 2988906 ~ 2992685 (+) |
| LOC110506694 | aif1 | coding | downstream | 17441 | 2997993 ~ 3004668 (+) |
| LOC110506718 | LOC102207154 | coding | downstream | 36553 | 3017105 ~ 3022686 (+) |
| LOC110518590 | LOC106605982 | coding | downstream | 101415 | 3081967 ~ 3091018 (+) |
| LOC110506827 | LOC106573691 | coding | downstream | 144959 | 3125511 ~ 3130057 (+) |
| G216613 | NA | non-coding | upstream | 2823 | 2975677 ~ 2976047 (+) |
| G216609 | NA | non-coding | upstream | 17836 | 2960181 ~ 2961034 (+) |
| G216479 | NA | non-coding | upstream | 77462 | 2889057 ~ 2901408 (+) |
| G216478 | NA | non-coding | upstream | 122155 | 2777367 ~ 2856715 (+) |
| G216619 | NA | non-coding | downstream | 13534 | 2994086 ~ 2994392 (+) |
| G216621 | LOC106606076 | non-coding | downstream | 15070 | 2995622 ~ 2996222 (+) |
| G216622 | LOC106606076 | non-coding | downstream | 15675 | 2996227 ~ 2996567 (+) |
| G216644 | NA | non-coding | downstream | 57158 | 3037710 ~ 3039784 (+) |
| G216438 | NA | other | upstream | 403971 | 2572395 ~ 2574899 (+) |
| G216353 | NA | other | upstream | 516126 | 2461217 ~ 2462744 (+) |
| ahr1a | LOC106605709 | other | upstream | 993074 | 1960781 ~ 1987480 (+) |
| G215843 | LOC100136727 | other | upstream | 1173615 | 1804388 ~ 1805255 (+) |
| G215830 | NA | other | upstream | 1231588 | 1670411 ~ 1747282 (+) |
| G216640 | LOC106606088 | other | downstream | 59434 | 3039986 ~ 3041517 (+) |
| G216673 | NA | other | downstream | 125802 | 3106354 ~ 3108233 (+) |
| G217146 | NA | other | downstream | 499764 | 3480316 ~ 3481536 (+) |
| LOC110520752 | LOC106606080 | other | downstream | 554625 | 3534519 ~ 3556267 (+) |
