Gene
RNA
| Item | Value |
|---|---|
| gene id | G216925 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 3011762 ~ 3012035 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU247152 | True | 274 | lncRNA | 0.38 | 1 | 3011762 | 3012035 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520729 | LOC106606076 | coding | downstream | 14337 | 2992224 ~ 2997425 (-) |
| LOC118964349 | LOC106573444 | coding | downstream | 23490 | 2963646 ~ 2988272 (-) |
| c4b | c4 | coding | downstream | 95407 | 2889071 ~ 2916355 (-) |
| LOC110517891 | LOC106606082 | coding | downstream | 142668 | 2856098 ~ 2869094 (-) |
| LOC110520772 | LOC108270036 | coding | downstream | 406996 | 2583240 ~ 2604766 (-) |
| LOC110506699 | LOC106606088 | coding | upstream | 10773 | 3022808 ~ 3058765 (-) |
| LOC110506785 | LOC106593475 | coding | upstream | 46294 | 3058329 ~ 3076503 (-) |
| LOC110520730 | LOC106573659 | coding | upstream | 79497 | 3091532 ~ 3098159 (-) |
| LOC110506763 | pon2 | coding | upstream | 87233 | 3099268 ~ 3123981 (-) |
| LOC118936609 | LOC106605979 | coding | upstream | 94536 | 3106571 ~ 3120111 (-) |
| G216920 | aif1 | non-coding | downstream | 7051 | 2997810 ~ 3004711 (-) |
| G216871 | NA | non-coding | downstream | 29979 | 2907312 ~ 2981783 (-) |
| G216893 | NA | non-coding | downstream | 50933 | 2960045 ~ 2960829 (-) |
| G216892 | NA | non-coding | downstream | 52753 | 2958556 ~ 2959009 (-) |
| G216877 | LOC106606081 | non-coding | downstream | 80399 | 2929099 ~ 2931363 (-) |
| G216911 | NA | non-coding | upstream | 8210 | 3020245 ~ 3021397 (-) |
| G216934 | NA | non-coding | upstream | 53118 | 3065153 ~ 3065479 (-) |
| G216938 | NA | non-coding | upstream | 61963 | 3073998 ~ 3074430 (-) |
| G216942 | NA | non-coding | upstream | 69857 | 3081892 ~ 3082106 (-) |
| G216944 | NA | non-coding | upstream | 74143 | 3086178 ~ 3086802 (-) |
| G216811 | NA | other | downstream | 273295 | 2736861 ~ 2738467 (-) |
| G216059 | NA | other | downstream | 886410 | 2124176 ~ 2125352 (-) |
| G216066 | NA | other | downstream | 889905 | 2121203 ~ 2121857 (-) |
| G216038 | NA | other | downstream | 953333 | 2057915 ~ 2058429 (-) |
| LOC110516567 | LOC106595628 | other | downstream | 1059174 | 1916571 ~ 1953363 (-) |
| G216902 | LOC106606079 | other | upstream | 33970 | 3046005 ~ 3059744 (-) |
| G217261 | NA | other | upstream | 326151 | 3338186 ~ 3338580 (-) |
| G217459 | NA | other | upstream | 674367 | 3686402 ~ 3689304 (-) |
| G218073 | LOC106605488 | other | upstream | 1427061 | 4439096 ~ 4440437 (-) |
| LOC118944829 | LOC106606066 | other | upstream | 1526627 | 4535483 ~ 4553394 (-) |
