G216911


Basic Information

Item Value
gene id G216911
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3020245 ~ 3021397 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU247135
TCAATGTCCAGTCAAGAGACAACTCTGCTCTGTCATGGACATGTTCACAACTAATGATGGCTTAAGTGGCCCGAACATTTTCACTTTGGGACAGTGAGTGTTCCAGCACTGGTGTTTTATGTCAGCACAAAGCAAACCCATGTTGCCCTTCACCCTGAGAACACATCTTATACATCTAATAAACTCCGTCTTAAATTCAATTTGTGCAGCATCCATTCTCTAGGGAATCTATCATACATATCAAACTGGTTGTTAATTGGATTCTCAGCCAATCATCTGGATATGAACAATCATTGAAGATCGTTTTATATCAGCCTTTTCACACTGCTAAGTTACGTGTCCACCCTCGGTAATGGAACCATGCGGGAAAGGAAACCATGTAGAGAATGTATCTGAGCCAGCCCAATACTTTGCAGGTCAGCATGATAGTGTGAAAACAGGTATTGGGATGTGCTCACACAGGCTGCCCAActctgaccaatcacatcagctctTTTGACAATAcgtgggcaaaagatcagaattgggcaaAAAACAAAAGGTGCACCTGGGGGGGGCCTCAGGACTGAGTTTGGAAAACCCTGCCTTAGCGAGCCAAACTGAAAAAAGGTTTGAAAGTTGCACGATTGTAGTCAGTAGGGTTATGATAGGCTAAAGCACAGAGGGAGCCAATCACCAAAGAGCATCCTGTGTAACAGATGATGGCCTGGTCCGGACGTTGACATCTAACTACATCAGGGATGGTCAACTCCAGTCCttctggggcctgattggtgtgATATTTTTGCtgcagctaacacacctgactccaataattaACTAAGCATGATCCTCAGTTTAGAATACAATGTGTCAGCTGTGTTTGCTATGAATGGGGTAATACTGCGACCCAAGATGACTGTAGTTTCCCATCCCTGATCTACATGTATGTATTGTATCTGTCATAATGTGTTTTTAACAAGCCTTTATTGAGCTACATAATCCACTGCTTTCATTCCAACCAAGTCAAAATGTCTCTTTCCCAGCCGGGTGTGTAAGTTCTAGCGAATAGCCTTCACAGGACTCTTGAAGCTGGAGGCAGCCTGGAGTTGGAGTTGATAAGCCATGGGGTGGATCTTGAAGCC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247135 True 1124 lncRNA 0.44 2 3020245 3021397

Neighbor

gene id symbol gene type direction distance location
LOC110520729 LOC106606076 coding downstream 22820 2992224 ~ 2997425 (-)
LOC118964349 LOC106573444 coding downstream 31973 2963646 ~ 2988272 (-)
c4b c4 coding downstream 103890 2889071 ~ 2916355 (-)
LOC110517891 LOC106606082 coding downstream 151151 2856098 ~ 2869094 (-)
LOC110520772 LOC108270036 coding downstream 415479 2583240 ~ 2604766 (-)
LOC110506699 LOC106606088 coding upstream 1411 3022808 ~ 3058765 (-)
LOC110506785 LOC106593475 coding upstream 36932 3058329 ~ 3076503 (-)
LOC110520730 LOC106573659 coding upstream 70135 3091532 ~ 3098159 (-)
LOC110506763 pon2 coding upstream 77871 3099268 ~ 3123981 (-)
LOC118936609 LOC106605979 coding upstream 85174 3106571 ~ 3120111 (-)
G216925 NA non-coding downstream 8210 3011762 ~ 3012035 (-)
G216920 aif1 non-coding downstream 15534 2997810 ~ 3004711 (-)
G216893 NA non-coding downstream 59416 2960045 ~ 2960829 (-)
G216892 NA non-coding downstream 61236 2958556 ~ 2959009 (-)
G216877 LOC106606081 non-coding downstream 88882 2929099 ~ 2931363 (-)
G216934 NA non-coding upstream 43756 3065153 ~ 3065479 (-)
G216938 NA non-coding upstream 52601 3073998 ~ 3074430 (-)
G216942 NA non-coding upstream 60495 3081892 ~ 3082106 (-)
G216944 NA non-coding upstream 64781 3086178 ~ 3086802 (-)
G216945 NA non-coding upstream 66411 3087808 ~ 3088229 (-)
G216811 NA other downstream 281778 2736861 ~ 2738467 (-)
G216059 NA other downstream 894893 2124176 ~ 2125352 (-)
G216066 NA other downstream 898388 2121203 ~ 2121857 (-)
G216038 NA other downstream 961816 2057915 ~ 2058429 (-)
LOC110516567 LOC106595628 other downstream 1067657 1916571 ~ 1953363 (-)
G216902 LOC106606079 other upstream 24608 3046005 ~ 3059744 (-)
G217261 NA other upstream 316789 3338186 ~ 3338580 (-)
G217459 NA other upstream 665005 3686402 ~ 3689304 (-)
G218073 LOC106605488 other upstream 1417699 4439096 ~ 4440437 (-)
LOC118944829 LOC106606066 other upstream 1517265 4535483 ~ 4553394 (-)

Expression


Co-expression Network