XLOC_021778 (npbwr2a)


Basic Information

Item Value
gene id XLOC_021778
gene name npbwr2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 30827959 ~ 30845859 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043204
ATGAGCAAACAAAAATATTGGATTTTGTGTAAAAACGCAGTAATGCATGCACTTTTCCATGtaataaactttcatttttatcattttaaaaaggcTATTATGGATTTCAAAGACACGATGGACAATGCAACAATGCAATCTTCATGCAACCTGGCCAGTCCGGTTTATAATCAGTCCAACTGCACCGTGTCTCCACCTTGGATGTTCCACCCAGATCTCTACATCTGGCTACCCGTGATTTACTCAATCATCTGCGCCGTGGGACTCACGGGCAACAGCGCCGTCATTTACGTGATCCTGAAGGCGCCTAAGATGAAAACAGTCACCAATTTATTCATTCTGAATTTGGCCATCGCCGACGACCTTTTCACACTAGTGCTGCCCATCAACATCGCCGAGCACCTGTTAAACTACTGGCCGTTTGGGGAGATTTTATGCAAAGTGATTTTGTCCATAGACCACTACAACATCTTCTCCAGCATCTTCTTCTTGACCGTGATGAGTGTGGACCGGTATCTGGTCGTGGTGTCCACTCTAGGATCCAAACGGATGCCCTACCGGACCTACCGGTTGGCCAAGACGGTCAGTCTGAGTGTTTGGGCTCTGGTCATTCTCGTAGTGATGCCCTTCACCGTTTTCGCCAGTGTTTACGTGAGTCCCGATGACGCGGAGAGCCGAAAGAGCTGCGTTTTGAGTTTCCCGAGTCCGGAGAGTTTCTGGTTCAAAGCCAGCCGGATTTACACGCTGGTCCTCGGGTTTGTCATCCCCGTCTCCACCATCTGCATCCTCTACACCGTGATGCTCTTCAGACTGAGACGGACGCGCCTCAGCTCAAACGGAAAGGCTCTGGACAAAGCCAAAAAGCGAGTCACTGTGATGGTCTTCATCGTGCTCGCCGTTTGCTTGTTCTGCTGGACTCCTTTTCATCTGAGCACGGTGGTCGCCCTCACTTCAGACTTGCCCACCACCCCGCTGGTTATAGGTATCTCTTATTTTATCACGGGACTGAGTTACGCCAACTCGTGTCTCAATCCGTTTCTTTACGCGTTCTTAGACGACAGTTTCAGGAGGGCGTTTAAAAAACTGTTGGAGTGCATGGAGTTGGTCGAGTTGTCTTACGTCCAACAGATGTTCAACGACTCGCGTTTTCAGGGGAATTTAAGTGCACTAGATGAAGTGGACGAGCCTCTACCTAGAAGCGCAAAGATCACCATCGTTGTTGTCTACTTGATAGTGTGCGTGGTGGGGCTCGTGGGGAACTGTCTGGTCATGTATGTAATTATCAGGTACACAAAGATGAAAACGGCCACCAATATTTACATCTTTAACCTGGCTTTGGCTGATGCACTGGTTCTGGCCACTCTTCCTTTCCAAGGCACTGATGTCATCCTAGGTTTCTGGCCCTTCGGTCTGCCCCTGTGCAAGGCTGTGGTAGCCATTGACTATTACAACATGTTCACAAGTGTCTTCACCTTGACCGTAATGAGTGTGGATCGCTACATAGCCGTCTGCCACCCTGTGCGCTCGCTGACAGTTCGGACCCCGCTCCGGGCCAAGCTGATCAATGTGGCGGTGTGGGTGCTGGCATCAGCTGTAGGACTGCCTGCTATGATCATGGGTCAGGTGGAGAAGGATGATCACGATGGTGCCGAGTGCATGGTGAGCCTGCCTGAACCAAGAAAGCACTGGGATCGTGTGTTCatgatgtgtgtgtttctcttctcTTTCTTGATCCCTGTGCTGATCATAAGCGTCTGCTACGGCCTGATGGTGCGTCGTTTGCGCAGTGTCCGTGTACTGTCCGGCTCACGGGAAAAAGACCGCAATCTGAGGAGAATCACCTATATGGTATTGTCGGTGGTGGCCGCTTTTGTGTTTTGCTGGATGCCGGTGCAGGTCTTGGCTTTGATTCAGGCTCTGGGTCATGTGGAACTCGGGGCCAGTCAGTCCTCGATGGCGGCTATGCATTTCTGCATTGCTTTGGGTTACGCAAACAGCTGTTTAAACCCCGTTCTCTATGCCTTCCTGGATGAAAACTTCAAGCGCTGTTTCCATGAGTTTTGTATCCCGGCCAATTCCGATCTCTTTCTAGAAGACCAGCGTAAGAGGTCATTGAGGCAGGGGAGAGAATGTGCTGAGCTGGAGGAAAAGGAGGTGGTGATTTATCATTGCGCTGCTCCTGTGTTAGCGGATTAG
>TCONS_00043205
ATGGAGTTGGTCGAGTTGTCTTACGTCCAACAGATGTTCAACGACTCGCGTTTTCAGGGGAATTTAAGTGCACTAGATGAAGTGGACGAGCCTCTACCTAGAAGCGCAAAGATCACCATCGTTGTTGTCTACTTGATAGTGTGCGTGGTGGGGCTCGTGGGGAACTGTCTGGTCATGTATGTAATTATCAGGTACACAAAGATGAAAACGGCCACCAATATTTACATCTTTAACCTGGCTTTGGCTGATGCACTGGTTCTGGCCACTCTTCCTTTCCAAGGCACTGATGTCATCCTAGGTTTCTGGCCCTTCGGTCTGCCCCTGTGCAAGGCTGTGGTAGCCATTGACTATTACAACATGTTCACAAGTGTCTTCACCTTGACCGTAATGAGTGTGGATCGCTACATAGCCGTCTGCCACCCTGTGCGCTCGCTGACAGTTCGGACCCCGCTCCGGGCCAAGCTGATCAATGTGGCGGTGTGGGTGCTGGCATCAGCTGTAGGACTGCCTGCTATGATCATGGGTCAGGTGGAGAAGGATGATCACGATGGTGCCGAGTGCATGGTGAGCCTGCCTGAACCAAGAAAGCACTGGGATCGTGTGTTCatgatgtgtgtgtttctcttctcTTTCTTGATCCCTGTGCTGATCATAAGCGTCTGCTACGGCCTGATGGTGCGTCGTTTGCGCAGTGTCCGTGTACTGTCCGGCTCACGGGAAAAAGACCGCAATCTGAGGAGAATCACCTATATGGTATTGTCGGTGGTGGCCGCTTTTGTGTTTTGCTGGATGCCGGTGCAGGTCTTGGCTTTGATTCAGGCTCTGGGTCATGTGGAACTCGGGGCCAGTCAGTCCTCGATGGCGGCTATGCATTTCTGCATTGCTTTGGGTTACGCAAACAGCTGTTTAAACCCCGTTCTCTATGCCTTCCTGGATGAAAACTTCAAGCGCTGTTTCCATGAGTTTTGTATCCCGGCCAATTCCGATCTCTTTCTAGAAGACCAGCGTAAGAGGTCATTGAGGCAGGGGAGAGAATGTGCTGAGCTGGAGGAAAAGGAGGTGGTGATTTATCATTGCGCTGCTCCTGTGTTAGCGGATTAG

Function

symbol description
npbwr2a Predicted to enable G protein-coupled receptor activity and neuropeptide binding activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection. Predicted to be integral component of plasma membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000079423

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043204 False 2196 mRNA 0.50 4 30827959 30845859
TCONS_00043205 True 1101 mRNA 0.51 3 30835589 30845859

Neighbor

gene id symbol gene type direction distance location
XLOC_021777 AL845357.1 coding upstream 55073 30764287 ~ 30772886 (+)
XLOC_021776 asxl1 coding upstream 75406 30730121 ~ 30752553 (+)
XLOC_021775 dnajc11a coding upstream 103050 30707837 ~ 30724909 (+)
XLOC_021774 NA coding upstream 394574 30402314 ~ 30433385 (+)
XLOC_021773 uts2a coding upstream 772240 30048849 ~ 30055719 (+)
XLOC_021779 XKR7 coding downstream 13227 30859086 ~ 30890850 (+)
XLOC_021780 cables2a coding downstream 52154 30898013 ~ 30919307 (+)
XLOC_021781 si:ch211-197l9.2 coding downstream 121827 30967686 ~ 30981438 (+)
XLOC_021782 BX649257.1 coding downstream 133526 30979385 ~ 30979499 (+)
XLOC_021783 si:ch211-197l9.2 coding downstream 139671 30985530 ~ 30996756 (+)
XLOC_021767 NA non-coding upstream 981080 29840859 ~ 29846879 (+)
XLOC_021766 BX571850.1 non-coding upstream 1239401 29588444 ~ 29588558 (+)
XLOC_021765 NA non-coding upstream 1244680 29580543 ~ 29583279 (+)
XLOC_021785 NA non-coding downstream 232705 31078564 ~ 31085951 (+)
XLOC_021790 CR759830.1 non-coding downstream 587414 31433273 ~ 31433348 (+)
XLOC_021791 CR759830.2 non-coding downstream 587720 31433579 ~ 31433663 (+)
XLOC_021793 BX927365.3 non-coding downstream 821570 31667429 ~ 31667543 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_12568625_12571184 NA coding CI01000001 null 12568534 ~ 12571943 (+)