G216971



Basic Information


Item Value
gene id G216971
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3164233 ~ 3164979 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU247202
GTTTAAACATGTGTACCTCATCAGTGACAGGTTTAAAGATGTGTCCCTCATCAGTGACACGTTTAAAGATGTGTCCCTCATCAGTGACATGTTAAAGATGTGTCCCTCATCAGTGACACGTTCATAGATGTGTCCCTCATCAGTGACATGTTAAAGATGTGTCCCTCATCAGTGACACGTTTATAGATGTGTCCCTCATCAGTGACACGTTTAAAGATGTGTACCTCATCAGTGACAGGTTTAAAGATGTGTACCTCATCAGTGACAGGTTTAAAGATGTGTCCCTCATCAGTGACATGTTTAAACATGTGTACCTCATCAGTGACACGTTTAAAGATGTGTCCCTCATCAGTGACAGGTTTAAAGATGTGTCCCTCATCAGTGACAGGTTTAAAGATTTGTCCCTCATCAGTGACATGTTATAGATGTGTACCTCATCAGTGACATGTTTAAAGATGTGTCCCTCATCAGTGACATGTTAAAGATGTGTCCCTCATCAGTGACATGTTAAAGATGTGTCCCTCATCAGTGACATGTTAAAGATGTGTCCCTCATCAGTGACATGTTAAAGATGTGTACCTCATCAGTGACATGTTTAAAGATGTGTCCCTCATCAGTGACATGTTAAAGATGTGTCCCTCATCAGTGACATGTTATAGATGTGTACCTCATCAGTGACATGTTTAAAGATGTGTCCCTCATCAGTGACATGTTAAAGATGTGTCCCTCATCAGTGACATGTTATAG

Function


NR:

description
uncharacterized protein LOC109988713

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU247202 True 747 lncRNA 0.41 1 3164233 3164979

Neighbor


gene id symbol gene type direction distance location
LOC110506836 LOC106605978 coding downstream 1310 3152009 ~ 3162923 (-)
LOC118936609 LOC106605979 coding downstream 44122 3106571 ~ 3120111 (-)
LOC110506763 pon2 coding downstream 57993 3099268 ~ 3123981 (-)
LOC110520730 LOC106573659 coding downstream 66074 3091532 ~ 3098159 (-)
LOC110506785 LOC106593475 coding downstream 87730 3058329 ~ 3076503 (-)
LOC118944808 NA coding upstream 72496 3237475 ~ 3238019 (-)
LOC110507312 LOC106595913 coding upstream 456843 3621822 ~ 3625100 (-)
LOC110507329 LOC106606059 coding upstream 554721 3719700 ~ 3725695 (-)
LOC110506742 LOC106584706 coding upstream 828035 3993014 ~ 3998119 (-)
LOC110506736 LOC106584706 coding upstream 864113 4029092 ~ 4039160 (-)
G216969 NA non-coding downstream 3686 3160275 ~ 3160547 (-)
G216964 NA non-coding downstream 12297 3151623 ~ 3151936 (-)
G216956 NA non-coding downstream 32214 3131795 ~ 3132019 (-)
G216980 NA non-coding upstream 23076 3188055 ~ 3189078 (-)
G216981 NA non-coding upstream 25337 3190316 ~ 3190593 (-)
G217000 NA non-coding upstream 62017 3226996 ~ 3227433 (-)
G217010 NA non-coding upstream 76392 3241371 ~ 3242201 (-)
G217016 NA non-coding upstream 83381 3248360 ~ 3248585 (-)
G216902 LOC106606079 other downstream 104489 3046005 ~ 3059744 (-)
G216811 NA other downstream 425766 2736861 ~ 2738467 (-)
G216059 NA other downstream 1038881 2124176 ~ 2125352 (-)
G216066 NA other downstream 1042376 2121203 ~ 2121857 (-)
G216038 NA other downstream 1105804 2057915 ~ 2058429 (-)
G217261 NA other upstream 173207 3338186 ~ 3338580 (-)
G217459 NA other upstream 521423 3686402 ~ 3689304 (-)
G218073 LOC106605488 other upstream 1274117 4439096 ~ 4440437 (-)
LOC118944829 LOC106606066 other upstream 1373683 4535483 ~ 4553394 (-)
LOC118944839 LOC106573494 other upstream 1478991 4634932 ~ 4648920 (-)

Expression



Co-expression Network