G217048


Basic Information

Item Value
gene id G217048
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3324637 ~ 3324851 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU247288
TACAGAAGCTCCAGACTCTGATGACTCACTCCTTTCTACCAGGGGGTTTTTGTCAAAGGCTTCACATCTACAGGGGGCTGCCGGGGTAGCCAGTGTTGCGGAACGACAGAGTCACCACAGAGTGGCAAAACTTGGCAAGCCACACCAACAAAACCTTGGCCAGATCTCACAGGTCATaatgactgtgtcccaaatggcaacctattccctacata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247288 True 215 lncRNA 0.51 1 3324637 3324851

Neighbor

gene id symbol gene type direction distance location
LOC110506902 LOC106573706 coding upstream 11165 3310514 ~ 3313472 (+)
LOC110506857 mroh1 coding upstream 82426 3202424 ~ 3242211 (+)
LOC110506827 LOC106573691 coding upstream 194580 3125511 ~ 3130057 (+)
LOC110518590 LOC106605982 coding upstream 233619 3081967 ~ 3091018 (+)
LOC110506718 LOC102207154 coding upstream 302970 3017105 ~ 3022686 (+)
LOC110520733 LOC106605973 coding downstream 134281 3459132 ~ 3491968 (+)
LOC118944810 NA coding downstream 163147 3487998 ~ 3490683 (+)
LOC110520734 LOC106605972 coding downstream 169265 3494116 ~ 3507117 (+)
LOC118936611 LOC106573422 coding downstream 182757 3507608 ~ 3533097 (+)
LOC110520752 LOC106606080 coding downstream 209668 3534519 ~ 3556267 (+)
G217047 NA non-coding upstream 563 3323491 ~ 3324074 (+)
G217043 NA non-coding upstream 9493 3314923 ~ 3315144 (+)
G217036 NA non-coding upstream 20458 3303481 ~ 3304179 (+)
G217035 NA non-coding upstream 31524 3292897 ~ 3293113 (+)
G216745 NA non-coding upstream 42811 3281555 ~ 3281826 (+)
G217055 NA non-coding downstream 11837 3336688 ~ 3337372 (+)
G217056 NA non-coding downstream 13624 3338475 ~ 3338765 (+)
G217065 NA non-coding downstream 26020 3350871 ~ 3351349 (+)
G217066 NA non-coding downstream 27573 3352424 ~ 3352651 (+)
G217071 NA non-coding downstream 33451 3358302 ~ 3358658 (+)
G216673 NA other upstream 216404 3106354 ~ 3108233 (+)
G216640 LOC106606088 other upstream 283120 3039986 ~ 3041517 (+)
G216438 NA other upstream 749738 2572395 ~ 2574899 (+)
G216353 NA other upstream 861893 2461217 ~ 2462744 (+)
G217146 NA other downstream 155465 3480316 ~ 3481536 (+)
LOC110507370 LOC106606027 other downstream 401679 3725954 ~ 3733696 (+)
G217809 LOC106593792 other downstream 817792 4142643 ~ 4143089 (+)
G217870 NA other downstream 972705 4297556 ~ 4302856 (+)

Expression


Co-expression Network