G217081


Basic Information

Item Value
gene id G217081
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3368331 ~ 3368897 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU247323
acgttttactgagttacagttcaaataaggagatcagtcaatttaaattaattaattaggctcTGGGAGTTTCAGGTGGACACacctgctgtcagcatgccaattgcacactctttcaaaacgtgagacatctgtggcattgtgttgtgtgacaaaactgcatagtGGCCTTTTTAGGTTTGcgtgcaactgtgtaatgatcatgttgtcagcttcttgatatacaacccctgtcaggtggatggattatcttggaaaaggacaaatgctcactaacagggatgtaaacaaatgtgtgcacaaaatgtgagagaaataagctatttgtgcgtatggaagatttctgtgatttttatttcagctcatgaaacatgggaccaacaccttacatgttgagtttatatgtttgttcagtgtaattagtAGCCAGAGCCCTTCAATGTTACTGCAGTAGAAGTCTCTGCCAGCAGCTAGCCACCTAACTGACAGTATCTACAAGCGACTATTTACCAGTTGTACTCATTCTCCGAGAGtcagtttttgtttgtttgggggATGTCTGTAGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247323 True 567 lncRNA 0.50 1 3368331 3368897

Neighbor

gene id symbol gene type direction distance location
LOC110506902 LOC106573706 coding upstream 54859 3310514 ~ 3313472 (+)
LOC110506857 mroh1 coding upstream 126120 3202424 ~ 3242211 (+)
LOC110506827 LOC106573691 coding upstream 238274 3125511 ~ 3130057 (+)
LOC110518590 LOC106605982 coding upstream 277313 3081967 ~ 3091018 (+)
LOC110506718 LOC102207154 coding upstream 346664 3017105 ~ 3022686 (+)
LOC110520733 LOC106605973 coding downstream 90235 3459132 ~ 3491968 (+)
LOC118944810 NA coding downstream 119101 3487998 ~ 3490683 (+)
LOC110520734 LOC106605972 coding downstream 125219 3494116 ~ 3507117 (+)
LOC118936611 LOC106573422 coding downstream 138711 3507608 ~ 3533097 (+)
LOC110520752 LOC106606080 coding downstream 165622 3534519 ~ 3556267 (+)
G217079 NA non-coding upstream 2118 3365829 ~ 3366213 (+)
G217074 NA non-coding upstream 7141 3360859 ~ 3361190 (+)
G217072 NA non-coding upstream 8829 3359030 ~ 3359502 (+)
G217071 NA non-coding upstream 9673 3358302 ~ 3358658 (+)
G217066 NA non-coding upstream 15680 3352424 ~ 3352651 (+)
G217220 NA non-coding downstream 317699 3686596 ~ 3688096 (+)
G217223 NA non-coding downstream 341900 3710797 ~ 3711204 (+)
LOC110493965 LOC106573899 non-coding downstream 381573 3738335 ~ 3754296 (+)
G216673 NA other upstream 260098 3106354 ~ 3108233 (+)
G216640 LOC106606088 other upstream 326814 3039986 ~ 3041517 (+)
G216438 NA other upstream 793432 2572395 ~ 2574899 (+)
G216353 NA other upstream 905587 2461217 ~ 2462744 (+)
G217146 NA other downstream 111419 3480316 ~ 3481536 (+)
LOC110507370 LOC106606027 other downstream 357633 3725954 ~ 3733696 (+)
G217809 LOC106593792 other downstream 773746 4142643 ~ 4143089 (+)
G217870 NA other downstream 928659 4297556 ~ 4302856 (+)

Expression


Co-expression Network