G217291



Basic Information


Item Value
gene id G217291
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3384108 ~ 3384328 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU247570
aatagcagcacacatggtgatatttcctccccgttggcctggcaaatccacagtagctctgtgaccgatgatattccgaccccgccttctgcatttggtcaggttgaagccagcctcatccacgtatacaaagttgtgagagggttcacttgattccaactccattatacactatatcccagaacacacagttgaatttgttttggtaaggaagagtgaca

Function


NR:

description
PREDICTED: uncharacterized protein LOC109062804

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU247570 True 221 lncRNA 0.46 1 3384108 3384328

Neighbor


gene id symbol gene type direction distance location
LOC118944808 NA coding downstream 146089 3237475 ~ 3238019 (-)
LOC110506836 LOC106605978 coding downstream 221185 3152009 ~ 3162923 (-)
LOC118936609 LOC106605979 coding downstream 263997 3106571 ~ 3120111 (-)
LOC110506763 pon2 coding downstream 277868 3099268 ~ 3123981 (-)
LOC110520730 LOC106573659 coding downstream 285949 3091532 ~ 3098159 (-)
LOC110507312 LOC106595913 coding upstream 237494 3621822 ~ 3625100 (-)
LOC110507329 LOC106606059 coding upstream 335372 3719700 ~ 3725695 (-)
LOC110506742 LOC106584706 coding upstream 608686 3993014 ~ 3998119 (-)
LOC110506736 LOC106584706 coding upstream 644764 4029092 ~ 4039160 (-)
LOC110505077 ulk4 coding upstream 750978 4135306 ~ 4354126 (-)
G217276 NA non-coding downstream 25987 3357734 ~ 3358121 (-)
G217274 NA non-coding downstream 31504 3352385 ~ 3352604 (-)
G217273 NA non-coding downstream 32522 3351323 ~ 3351586 (-)
G217270 NA non-coding downstream 35599 3348152 ~ 3348509 (-)
G217265 NA non-coding downstream 41087 3342815 ~ 3343021 (-)
G217292 NA non-coding upstream 1021 3385349 ~ 3385620 (-)
G217297 NA non-coding upstream 5175 3389503 ~ 3389946 (-)
G217341 NA non-coding upstream 86626 3470954 ~ 3472005 (-)
G217344 NA non-coding upstream 89758 3474086 ~ 3475610 (-)
G217349 LOC106605973 non-coding upstream 97342 3481670 ~ 3484099 (-)
G217261 NA other downstream 45528 3338186 ~ 3338580 (-)
G216902 LOC106606079 other downstream 324364 3046005 ~ 3059744 (-)
G216811 NA other downstream 645641 2736861 ~ 2738467 (-)
G216059 NA other downstream 1258756 2124176 ~ 2125352 (-)
G216066 NA other downstream 1262251 2121203 ~ 2121857 (-)
G217459 NA other upstream 302074 3686402 ~ 3689304 (-)
G218073 LOC106605488 other upstream 1054768 4439096 ~ 4440437 (-)
LOC118944829 LOC106606066 other upstream 1154334 4535483 ~ 4553394 (-)
LOC118944839 LOC106573494 other upstream 1259642 4634932 ~ 4648920 (-)
G219200 NA other upstream 1386022 4770350 ~ 4772051 (-)

Expression



Co-expression Network