G217341


Basic Information

Item Value
gene id G217341
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3470954 ~ 3472005 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU247620
AAACAGAGAATAAAATACAATAGCGTTCTCTCTCTAACGCCTTGGCAACTTCTGTGGAAACCAACCTTCAATAAAACAGAGAATAAAATACAATAGCCTTCTCTCTCTAACGCCTTGGCAACTTCTGTGGAAACCAACCTTCAATAAAACAgagaataaaatacagtaggtgTCTGTCTCTAATGCCTTGGCACTATCTGTGCCTGGCTCACAATCAGAACAAGTGCTTGAGCTTAACTGATACTACAGCCAATAAAACAGACACTGGATCACGCCTCAATGACTACAAGtgttaataaaataaatatgctGCAATGCATAAAAAAACAGTGCCTTCTGAGGGCGTCTTTGTCTGCTATGgcccagtactgtactgtacagggagtatcttgtcccatagtccttctctctgtactgtactgtatagggagtatcttgtcccatagtccttctctctgtactgtacagtatcttATCTTATCTGTATcttgtcccatagtccttctctctgtactgtacagtatcttATCTTATCTGTATcttgtcccatagtccttctctctgtactgtacagtacagggagtatcttgtcccatagtccttctctctgtactgtacagtacagggagtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247620 True 631 lncRNA 0.41 2 3470954 3472005

Neighbor

gene id symbol gene type direction distance location
LOC118944808 NA coding downstream 232935 3237475 ~ 3238019 (-)
LOC110506836 LOC106605978 coding downstream 308031 3152009 ~ 3162923 (-)
LOC118936609 LOC106605979 coding downstream 350843 3106571 ~ 3120111 (-)
LOC110506763 pon2 coding downstream 364714 3099268 ~ 3123981 (-)
LOC110520730 LOC106573659 coding downstream 372795 3091532 ~ 3098159 (-)
LOC110507312 LOC106595913 coding upstream 149817 3621822 ~ 3625100 (-)
LOC110507329 LOC106606059 coding upstream 247695 3719700 ~ 3725695 (-)
LOC110506742 LOC106584706 coding upstream 521009 3993014 ~ 3998119 (-)
LOC110506736 LOC106584706 coding upstream 557087 4029092 ~ 4039160 (-)
LOC110505077 ulk4 coding upstream 663301 4135306 ~ 4354126 (-)
G217297 NA non-coding downstream 81008 3389503 ~ 3389946 (-)
G217292 NA non-coding downstream 85334 3385349 ~ 3385620 (-)
G217291 NA non-coding downstream 86626 3384108 ~ 3384328 (-)
G217276 NA non-coding downstream 112833 3357734 ~ 3358121 (-)
G217274 NA non-coding downstream 118350 3352385 ~ 3352604 (-)
G217344 NA non-coding upstream 2081 3474086 ~ 3475610 (-)
G217349 LOC106605973 non-coding upstream 9665 3481670 ~ 3484099 (-)
G217348 NA non-coding upstream 17023 3489028 ~ 3490853 (-)
G217374 NA non-coding upstream 57583 3529588 ~ 3532208 (-)
G217387 LOC108436590 non-coding upstream 73975 3545980 ~ 3546966 (-)
G217261 NA other downstream 132374 3338186 ~ 3338580 (-)
G216902 LOC106606079 other downstream 411210 3046005 ~ 3059744 (-)
G216811 NA other downstream 732487 2736861 ~ 2738467 (-)
G216059 NA other downstream 1345602 2124176 ~ 2125352 (-)
G216066 NA other downstream 1349097 2121203 ~ 2121857 (-)
G217459 NA other upstream 214397 3686402 ~ 3689304 (-)
G218073 LOC106605488 other upstream 967091 4439096 ~ 4440437 (-)
LOC118944829 LOC106606066 other upstream 1066657 4535483 ~ 4553394 (-)
LOC118944839 LOC106573494 other upstream 1171965 4634932 ~ 4648920 (-)
G219200 NA other upstream 1298345 4770350 ~ 4772051 (-)

Expression


Co-expression Network