G217349 (LOC106605973)


Basic Information

Item Value
gene id G217349
gene name LOC106605973
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3481670 ~ 3484099 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU247630
ATCAAcctccattccactgattccgtaCCACTGAATCATTTATAGGATCTCAATGTTAACATACAGTATACTATGCATAGAATACATTGCATCTACTCACCGAAGGCACCATTTGTGTACTGGAATATTCCAGTTTTGCCAAAAGTATGTGATGGTCTCAGAGTTCCACCAGTCTCTGTAAAACTCTCGGTCTCCAAATTGCAGGAGCTCAGCAATAAAGTTCAAGGACGAGTGGAAGAACCAGTAGAAGAATATCAACCAGAGAAGATGATTGGGCACGGCTAGTCTGAGTAGACGCTCCATCATCATAGGCAGGTCCATATCCTCCAATGGCTTCATAGAACTCTGAATAATGGGTATCATCCACTGGAGGCAAATAAGAGACCGATGAGGTGAATAAACAGCACAAATCATAAATAAAATGAGGTGCTTATTCTCAATAAATACATGTAGTCACTATACATAAGTCAATGTCAGGAGAAAACATACCTGCtgtgttaatcccaccaataacTGGGTGAAGAACAGCTGGGAAGACAGATGATTTGTTTACTTAGCATTTCTCCTCTAAATCAAACaaagatactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcaggaaaaACGCTGTCTGCCTTTTATCTTTGGATAAGTCTTGGGACCAGAGTGCACATCTCCACAGTCGACCAATAACCAAGCTAATCTTCTAATGGAGGTCCAGAGAAATTCACAATGGAACTTGACATTGTTAAATAAGATACTTCTATTTGTTCTATCcatgtttgctgtagatgactgtgtcagatcgtattgaagagaatagatctgatgtttgctgtagatgactgtcagatcgtattgaagagaatagatctgatgtttgctgtagatgactgtgtcagatcgtattgaagagaatagatctgatgtttgctgtagatgactgtgtcagatcatattgaagagaatagatctgatctgatgtttgctgtagatgactgtgtcagatcatattgaagagaatagatctgatgtttgctgtagatgactgtgtcagatcgtattgaagagaatagatctgatgtttgctgtagatgactgtgtcagatcgtattgaagagaatagatctgatgtttgctgcagatgactgtgtcagatcgtattgaagagaatagatctgatgtttgctgtagatgactgtgtcagatcatattgaagagaatagatctgatctgatgtttgctgtagatgactgtgtcagatcgtattgaagagaatagatctgatgtttgctgtagatgactgtgtcagatcatattgaagagaatagatctgatgtttgctgtagatgactgtgtcagatcatattgaagagaatagatctgatctgatgtttgctgtagatgactgtgtcagatcatattgaagagaatagatctgatgtttgctgtagatgactgtgtcagatcatattgaagagaatagatctgatgtttgctgtagatgactgtgtcagatcatattgaagagaatagatctgatgtttgctgtagatgactgtgtcagatcatattgaagagaatagatctgatgtttctgtatctctataatgtgctCCTTCACATGGGGCTAAACAGGAAGTTGTACATCTTCTTTTATACCCATAGCACAACATTGGGAAATAACCAGTAGGACAAAGCCGTgataacatcaactgttcaatcTAGTTTACAGAGTATAAAGCAGCGTACTAACAAACCAATGCAGAAAGGGTGATTGGGGACAGAACTCACCATCTCAAAAAGCCTCCTTAGCAGGAAGCTCATTCGAATCCGTGGAGACCGGGGGAAGTTTAATTCATAGCAGAGGGTTGGTGCAAAAACAAAATAATACAAATCTAAAAACACAAGAGAGattagaaagaaa

Function

NR:

description
diacylglycerol O-acyltransferase 1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247630 True 1983 lncRNA 0.41 4 3481670 3484099

Neighbor

gene id symbol gene type direction distance location
LOC118944808 NA coding downstream 243651 3237475 ~ 3238019 (-)
LOC110506836 LOC106605978 coding downstream 318747 3152009 ~ 3162923 (-)
LOC118936609 LOC106605979 coding downstream 361559 3106571 ~ 3120111 (-)
LOC110506763 pon2 coding downstream 375430 3099268 ~ 3123981 (-)
LOC110520730 LOC106573659 coding downstream 383511 3091532 ~ 3098159 (-)
LOC110507312 LOC106595913 coding upstream 137723 3621822 ~ 3625100 (-)
LOC110507329 LOC106606059 coding upstream 235601 3719700 ~ 3725695 (-)
LOC110506742 LOC106584706 coding upstream 508915 3993014 ~ 3998119 (-)
LOC110506736 LOC106584706 coding upstream 544993 4029092 ~ 4039160 (-)
LOC110505077 ulk4 coding upstream 651207 4135306 ~ 4354126 (-)
G217344 NA non-coding downstream 6060 3474086 ~ 3475610 (-)
G217341 NA non-coding downstream 9665 3470954 ~ 3472005 (-)
G217297 NA non-coding downstream 91724 3389503 ~ 3389946 (-)
G217292 NA non-coding downstream 96050 3385349 ~ 3385620 (-)
G217291 NA non-coding downstream 97342 3384108 ~ 3384328 (-)
G217348 NA non-coding upstream 4929 3489028 ~ 3490853 (-)
G217374 NA non-coding upstream 45489 3529588 ~ 3532208 (-)
G217387 LOC108436590 non-coding upstream 61881 3545980 ~ 3546966 (-)
G217439 NA non-coding upstream 152817 3636916 ~ 3644304 (-)
G217469 NA non-coding upstream 222855 3706954 ~ 3707763 (-)
G217261 NA other downstream 143090 3338186 ~ 3338580 (-)
G216902 LOC106606079 other downstream 421926 3046005 ~ 3059744 (-)
G216811 NA other downstream 743203 2736861 ~ 2738467 (-)
G216059 NA other downstream 1356318 2124176 ~ 2125352 (-)
G216066 NA other downstream 1359813 2121203 ~ 2121857 (-)
G217459 NA other upstream 202303 3686402 ~ 3689304 (-)
G218073 LOC106605488 other upstream 954997 4439096 ~ 4440437 (-)
LOC118944829 LOC106606066 other upstream 1054563 4535483 ~ 4553394 (-)
LOC118944839 LOC106573494 other upstream 1159871 4634932 ~ 4648920 (-)
G219200 NA other upstream 1286251 4770350 ~ 4772051 (-)

Expression


Co-expression Network