G217348


Basic Information

Item Value
gene id G217348
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3489028 ~ 3490853 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU247629
GCCTCAACATCTTCAGTGGAACACTGACCAGGTACTGTGAAGACAACATCAGCAACATTAAGTTTTAGTTTTCAAGAACAGTTTTCAACACAGTCGTCATCTCCTTTATCCACAGTGAACAGGAAAATAATGTTTCCACTCCAGACAGCTAACCTCTGGAATGACACCtgaggtaacagacagacagctaacctACGGAATGACACCtgaggtaacagacagacagctaacctATGGAATGACACCtgagGTAACAGACAGGTAGCTAACCTATGGAATGACACCTAGTTTGTACAGAAAATAAAGGTATCTGAGGTAACAGACTGGTAGCTAACCTATGGAACGACACCtgaggtaacagacagacagctaacctATGGAATGACACCTAGTTTGTACAGGAAATAAAGGTATCTGAGGTAACAGACAGGTAGCTAACCTACGGAATGACTGCTGGATGACTATCAAGCCTCGCCTCATTGCTCTGAGTGATGGGGAGCTGACAGAACCCTGCTGTGTGACCCTCTGATCTACAGATCCCAGTCTCCTGATCCCTCCTGGCATTACtcaggggtttgtgtgtgtgtatgtgtgtgagagagtgtgtgtgtgtatgtgtgtgtgtgtgtgtctgtctgtatgtgtgtgacaCAAGGATCCCTCCTGTCATTActcaggggagagggggagactggtGTCCCGCAGGGCGCTGTGGTGCTCCGCTCCTCTCTGCTCCGCTCGCTGTCCTCTGAAGGTCAGCGTTTaaaacagcagcagcagccccgtttgtctgtctgtccgggatggggatgaggagagggagggagccgtATCTCTGTGAACCTGCTGACTGAACAGGCTCCTCACCGTACACTGCTCTTATCTCCTCCTCCAGAAGCACAGCAGCCTGATATGGCCTTGTGTTCcactcctttcctcctcctctcatcccagcTACACTAACGTCCCTCCAACACTGACCTTCGTCAATGATGAAGAGTGCTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247629 True 1007 lncRNA 0.50 2 3489028 3490853

Neighbor

gene id symbol gene type direction distance location
LOC118944808 NA coding downstream 251009 3237475 ~ 3238019 (-)
LOC110506836 LOC106605978 coding downstream 326105 3152009 ~ 3162923 (-)
LOC118936609 LOC106605979 coding downstream 368917 3106571 ~ 3120111 (-)
LOC110506763 pon2 coding downstream 382788 3099268 ~ 3123981 (-)
LOC110520730 LOC106573659 coding downstream 390869 3091532 ~ 3098159 (-)
LOC110507312 LOC106595913 coding upstream 130969 3621822 ~ 3625100 (-)
LOC110507329 LOC106606059 coding upstream 228847 3719700 ~ 3725695 (-)
LOC110506742 LOC106584706 coding upstream 502161 3993014 ~ 3998119 (-)
LOC110506736 LOC106584706 coding upstream 538239 4029092 ~ 4039160 (-)
LOC110505077 ulk4 coding upstream 644453 4135306 ~ 4354126 (-)
G217349 LOC106605973 non-coding downstream 4929 3481670 ~ 3484099 (-)
G217344 NA non-coding downstream 13418 3474086 ~ 3475610 (-)
G217341 NA non-coding downstream 17023 3470954 ~ 3472005 (-)
G217297 NA non-coding downstream 99082 3389503 ~ 3389946 (-)
G217292 NA non-coding downstream 103408 3385349 ~ 3385620 (-)
G217374 NA non-coding upstream 38735 3529588 ~ 3532208 (-)
G217387 LOC108436590 non-coding upstream 55127 3545980 ~ 3546966 (-)
G217439 NA non-coding upstream 146063 3636916 ~ 3644304 (-)
G217469 NA non-coding upstream 216101 3706954 ~ 3707763 (-)
G217539 NA non-coding upstream 346277 3837130 ~ 3837331 (-)
G217261 NA other downstream 150448 3338186 ~ 3338580 (-)
G216902 LOC106606079 other downstream 429284 3046005 ~ 3059744 (-)
G216811 NA other downstream 750561 2736861 ~ 2738467 (-)
G216059 NA other downstream 1363676 2124176 ~ 2125352 (-)
G216066 NA other downstream 1367171 2121203 ~ 2121857 (-)
G217459 NA other upstream 195549 3686402 ~ 3689304 (-)
G218073 LOC106605488 other upstream 948243 4439096 ~ 4440437 (-)
LOC118944829 LOC106606066 other upstream 1047809 4535483 ~ 4553394 (-)
LOC118944839 LOC106573494 other upstream 1153117 4634932 ~ 4648920 (-)
G219200 NA other upstream 1279497 4770350 ~ 4772051 (-)

Expression


Co-expression Network