G217374


Basic Information

Item Value
gene id G217374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3529588 ~ 3532208 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU247662
TCCAACCCTGTCATgtaaacagtaggctataggccacTCAACCCAGTAAATGGCAAATATGAGCTACAAAAAGGAACATCCTGAATGGTTCTTTGGACTTTTGGTGTAACCTGGACATCATATCATCTGTTCTGTATAATAGCCCTGAGTGTTTTCATGATATACATGTCAATAGACTGAAGAGAGTTAGTGGATGGTGTTTATAATAGGGAATGTAACTGACTGACCCTGAACTGGATCCTCTGTGGCATAGTGAGGTCCCAGTAAAAGAGACCGACTCCTATATTGTTCTGACCGACTGCTTGCTCAGGGCCAGACCGACATattagtaccttgtcagctcggggatttgaacttgaaacctttcggttactagtccaacgctctaaccactaggctaccctgccgccccttagtGAGGTCACAGTAACAGCAAATCCTATACTGTTCTAAACTGGATCTTCGATGGCTGCAGAATCTTTAGTGAGGTCACAGTAACAGAGCACCTCCTATATTGTTCTGAACTGGATCCTCTGTGACTGCAGCATCTTTAGTGAGGTCACAGTAACAAAGCGACTCCTATAAAGTTCTGAACTGGATCCTCTGTGACTGCAGCATCTTTAGTGAGGTCACAGTAACAGAGCGACTCCTATAAAGTTCTGAACTGGATCCTCTGTGACTGCAGCATCTTTAGTGAGGTCACAGTAACATAGGGACTCCTATATCATTCTGTCTGTGGGGAAACTAAGTTTGATCTAAAAAAGTTGATCGGTCACTCAAACCATTTTGTACAATCAcaaaataaaatcaataaaaaatgttttcaatTTAGAAATGGAGTGAAAATATTCATGTGCAGTTTAAACAACCATCTACAGAGTCACGTTTAAGAAAAATAGTCCAACATTAGATCCTGTGTATGAGGTGGATACTCCTTCTGATAAGGCCTGCAGGCCTTTCAAACTGtgaatgagtcccaaatggcaccctattccctatttagtgccctacatttgaccagagccttatggaccCAGGTAtaaagtgcactataaagggagtagggtgctatttgggacgtaaTCAGTGAACCCACAAACATTTGAACCCCACGAGGAAAAGAAAAACAGCCATATGTCAAGAAATGCACAACGTGTTCATTGGAACAGTCCATCCCACTGGAACTCATGTGACTAGTGAGTGTGAAGGTTTGGTCACTGTCTTTCTCCACTAGATATCTGTGCAGATTAAAGAAaggagacaaagagaggaagACACTTTATGACTATTGTGATGCCACCAGTATTTTGTCCTTGTCCCTCTTCTTCTTTGTTAAATAGTGGACTCGTAGTGTGCCGTGCTGCTGCTGCCCTTAGGAGACGTTTTGAGAAGGACTACTGGCTCCTGCATACTGCTACCACTGGGGTCTGGTTCTGGGGCCACCAGGGCCGGAGACCCCTCCTCTCCATACCCCTCCTGGTCCTGCGTAGTGGTGGGAGTGGAGGA

Function

NR:

description
solute carrier family 45 member 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247662 True 1506 lncRNA 0.44 2 3529588 3532208

Neighbor

gene id symbol gene type direction distance location
LOC118944808 NA coding downstream 291569 3237475 ~ 3238019 (-)
LOC110506836 LOC106605978 coding downstream 366665 3152009 ~ 3162923 (-)
LOC118936609 LOC106605979 coding downstream 409477 3106571 ~ 3120111 (-)
LOC110506763 pon2 coding downstream 423348 3099268 ~ 3123981 (-)
LOC110520730 LOC106573659 coding downstream 431429 3091532 ~ 3098159 (-)
LOC110507312 LOC106595913 coding upstream 89614 3621822 ~ 3625100 (-)
LOC110507329 LOC106606059 coding upstream 187492 3719700 ~ 3725695 (-)
LOC110506742 LOC106584706 coding upstream 460806 3993014 ~ 3998119 (-)
LOC110506736 LOC106584706 coding upstream 496884 4029092 ~ 4039160 (-)
LOC110505077 ulk4 coding upstream 603098 4135306 ~ 4354126 (-)
G217348 NA non-coding downstream 38735 3489028 ~ 3490853 (-)
G217349 LOC106605973 non-coding downstream 45489 3481670 ~ 3484099 (-)
G217344 NA non-coding downstream 53978 3474086 ~ 3475610 (-)
G217341 NA non-coding downstream 57583 3470954 ~ 3472005 (-)
G217297 NA non-coding downstream 139642 3389503 ~ 3389946 (-)
G217387 LOC108436590 non-coding upstream 13772 3545980 ~ 3546966 (-)
G217439 NA non-coding upstream 104708 3636916 ~ 3644304 (-)
G217469 NA non-coding upstream 174746 3706954 ~ 3707763 (-)
G217539 NA non-coding upstream 304922 3837130 ~ 3837331 (-)
G217543 NA non-coding upstream 311887 3844095 ~ 3844517 (-)
G217261 NA other downstream 191008 3338186 ~ 3338580 (-)
G216902 LOC106606079 other downstream 469844 3046005 ~ 3059744 (-)
G216811 NA other downstream 791121 2736861 ~ 2738467 (-)
G216059 NA other downstream 1404236 2124176 ~ 2125352 (-)
G216066 NA other downstream 1407731 2121203 ~ 2121857 (-)
G217459 NA other upstream 154194 3686402 ~ 3689304 (-)
G218073 LOC106605488 other upstream 906888 4439096 ~ 4440437 (-)
LOC118944829 LOC106606066 other upstream 1006454 4535483 ~ 4553394 (-)
LOC118944839 LOC106573494 other upstream 1111762 4634932 ~ 4648920 (-)
G219200 NA other upstream 1238142 4770350 ~ 4772051 (-)

Expression


Co-expression Network