G217469


Basic Information

Item Value
gene id G217469
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3706954 ~ 3707763 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU247770
ATCATTTTATTTCATCCTTTATTTTCTCCTATTTGACAAGATGGCCGACTGAGCCAAGACAAAATATATCCCAGTGTTTGTGATCCTCAATGAATCACTATTGAGCTTGTGACAAGTGTTAACAATGAAGCAGACATGTTAGACGTAGTGTGAGGAGCTCAGTGTTCTGTCTACTAAAGCAGAGAGGTTCCAGTTCAGTTGTGTTGTCCACATCATCCTCCATATGTCCTTTGGGGGGAGCAGTTTCTGAAGTGTGCCTCCTGATTCTTCTTCAGATGAAATCTGGGACTGTAGGAATTCACAGTTAGTCAGCCGACACAATCGGTGCAGCTTAAAATAAAATAACTCTTCAAAGATTCCAAGTCTATAAAAAGGAGTGGTGTGTTGGGGAGTGAGGGTCAGAGGTGGTCGCTAGTCTGCCTGGTGATGCACATGGAGTCCAGTCCATATGATGGTCCTGTAGAAGCAGTGAAATCTTCCTCATTCCTCCCTTCCTTGAAGTAATCACTGATTAGACATGACAGAACAGGTGAACAAACCCAAGGCTGCCTTCACATGGCTTCCATCTGTCCAGACAGTCATTCAGACAGAAGCTTTGAGTTGAGTCAGTTCATCCCACACTCCACACCCTCCTCCCACAGCGCTAGTGAGGTGGCGGCCGGGCCTGGCCCAACATCCTGAGCCGGCTCTGGTCGATGACGTCTAGAAGGTTCTTGGCGTCTACGGCCAGGGCGTGGGCGGCCGTCAGCATCTGTTTCTTGTAGTCCTGCTGCAAGCTGGTCATGA

Function

NR:

description
PREDICTED: focal adhesion kinase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247770 True 786 lncRNA 0.48 2 3706954 3707763

Neighbor

gene id symbol gene type direction distance location
LOC110507312 LOC106595913 coding downstream 81854 3621822 ~ 3625100 (-)
LOC118944808 NA coding downstream 468935 3237475 ~ 3238019 (-)
LOC110506836 LOC106605978 coding downstream 544031 3152009 ~ 3162923 (-)
LOC118936609 LOC106605979 coding downstream 586843 3106571 ~ 3120111 (-)
LOC110506763 pon2 coding downstream 600714 3099268 ~ 3123981 (-)
LOC110507329 LOC106606059 coding upstream 11937 3719700 ~ 3725695 (-)
LOC110506742 LOC106584706 coding upstream 285251 3993014 ~ 3998119 (-)
LOC110506736 LOC106584706 coding upstream 321329 4029092 ~ 4039160 (-)
LOC110505077 ulk4 coding upstream 427543 4135306 ~ 4354126 (-)
LOC118944827 cck-l coding upstream 745728 4453491 ~ 4456931 (-)
G217439 NA non-coding downstream 62650 3636916 ~ 3644304 (-)
G217387 LOC108436590 non-coding downstream 159988 3545980 ~ 3546966 (-)
G217374 NA non-coding downstream 174746 3529588 ~ 3532208 (-)
G217348 NA non-coding downstream 216101 3489028 ~ 3490853 (-)
G217349 LOC106605973 non-coding downstream 222855 3481670 ~ 3484099 (-)
G217539 NA non-coding upstream 129367 3837130 ~ 3837331 (-)
G217543 NA non-coding upstream 136332 3844095 ~ 3844517 (-)
G217652 NA non-coding upstream 171386 3879149 ~ 3879388 (-)
G217654 NA non-coding upstream 177966 3885729 ~ 3886023 (-)
G217662 LOC106584755 non-coding upstream 202182 3909945 ~ 4025905 (-)
G217459 NA other downstream 17650 3686402 ~ 3689304 (-)
G217261 NA other downstream 368374 3338186 ~ 3338580 (-)
G216902 LOC106606079 other downstream 647210 3046005 ~ 3059744 (-)
G216811 NA other downstream 968487 2736861 ~ 2738467 (-)
G216059 NA other downstream 1581602 2124176 ~ 2125352 (-)
G218073 LOC106605488 other upstream 731333 4439096 ~ 4440437 (-)
LOC118944829 LOC106606066 other upstream 830899 4535483 ~ 4553394 (-)
LOC118944839 LOC106573494 other upstream 936207 4634932 ~ 4648920 (-)
G219200 NA other upstream 1062587 4770350 ~ 4772051 (-)
G219290 LOC106593286 other upstream 1300321 5008084 ~ 5009406 (-)

Expression


Co-expression Network