G217546


Basic Information

Item Value
gene id G217546
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3846751 ~ 3846981 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU247853
tccagaagaagattgggagaatgtcatatggtcagatgaaaccacaatataactttttggtaaaaaaatcaactcgtcgtgtttggaggacaaagaatgctgagttgcatccaaagaacaccatacctactgtgatgcatgggggtggaaacatcatgctttggggctgtttttctgcaaagggaccaggacgactgatccgtgtaaaggaaagaatgaatggggccatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247853 True 231 lncRNA 0.36 1 3846751 3846981

Neighbor

gene id symbol gene type direction distance location
LOC110493962 pgcp coding upstream 43027 3754666 ~ 3803724 (+)
LOC110493965 LOC106573899 coding upstream 92456 3738335 ~ 3754296 (+)
LOC110507370 LOC106606027 coding upstream 113055 3725954 ~ 3733696 (+)
LOC110520760 LOC106606028 coding upstream 138974 3558280 ~ 3707777 (+)
LOC110520752 LOC106606080 coding upstream 290484 3534519 ~ 3556267 (+)
LOC110507394 LOC106595324 coding downstream 7466 3854447 ~ 3874865 (+)
LOC118964350 NA coding downstream 51245 3898226 ~ 3910037 (+)
LOC118944821 LOC106584755 coding downstream 70010 3916991 ~ 3924440 (+)
LOC110520766 LOC106584755 coding downstream 118477 3965458 ~ 3968265 (+)
LOC110506729 LOC106584755 coding downstream 175994 4022975 ~ 4025061 (+)
G217521 NA non-coding upstream 41687 3804811 ~ 3805064 (+)
G217244 NA non-coding upstream 44221 3799921 ~ 3802530 (+)
G217223 NA non-coding upstream 135547 3710797 ~ 3711204 (+)
G217220 NA non-coding upstream 158655 3686596 ~ 3688096 (+)
G217552 NA non-coding downstream 3837 3850818 ~ 3851040 (+)
G217554 NA non-coding downstream 27962 3874943 ~ 3875184 (+)
G217568 NA non-coding downstream 28918 3875899 ~ 3876116 (+)
G217569 NA non-coding downstream 29569 3876550 ~ 3876779 (+)
G217570 NA non-coding downstream 38839 3885820 ~ 3886047 (+)
G217146 NA other upstream 365215 3480316 ~ 3481536 (+)
G216673 NA other upstream 738518 3106354 ~ 3108233 (+)
G216640 LOC106606088 other upstream 805234 3039986 ~ 3041517 (+)
G217809 LOC106593792 other downstream 295662 4142643 ~ 4143089 (+)
G217870 NA other downstream 450575 4297556 ~ 4302856 (+)
G217896 NA other downstream 604773 4451754 ~ 4452556 (+)
G218309 NA other downstream 1090116 4937097 ~ 4939894 (+)
G218293 NA other downstream 1098022 4945003 ~ 4961450 (+)

Expression


Co-expression Network