G217568


Basic Information

Item Value
gene id G217568
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3875899 ~ 3876116 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU247884
aaatactggtgtgcaataCTAGTGTgcttttacagatgggctatgtacggctgcagcgatcggttagctgctcggatagctgatgtttaaagttagtgagggaaatataagtctccagcttcagttatttttgcaatacattccagtcattggcagcagagaactggaaggaaaggcagccaaagtaggtgttggctttggggatgaccagtgagata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247884 True 218 lncRNA 0.44 1 3875899 3876116

Neighbor

gene id symbol gene type direction distance location
LOC110507394 LOC106595324 coding upstream 1034 3854447 ~ 3874865 (+)
LOC110493962 pgcp coding upstream 72175 3754666 ~ 3803724 (+)
LOC110493965 LOC106573899 coding upstream 121604 3738335 ~ 3754296 (+)
LOC110507370 LOC106606027 coding upstream 142203 3725954 ~ 3733696 (+)
LOC110520760 LOC106606028 coding upstream 168122 3558280 ~ 3707777 (+)
LOC118964350 NA coding downstream 22110 3898226 ~ 3910037 (+)
LOC118944821 LOC106584755 coding downstream 40875 3916991 ~ 3924440 (+)
LOC110520766 LOC106584755 coding downstream 89342 3965458 ~ 3968265 (+)
LOC110506729 LOC106584755 coding downstream 146859 4022975 ~ 4025061 (+)
LOC110512888 ctnnb1 coding downstream 220633 4096749 ~ 4135152 (+)
G217554 NA non-coding upstream 715 3874943 ~ 3875184 (+)
G217552 NA non-coding upstream 24859 3850818 ~ 3851040 (+)
G217546 NA non-coding upstream 28918 3846751 ~ 3846981 (+)
G217521 NA non-coding upstream 70835 3804811 ~ 3805064 (+)
G217244 NA non-coding upstream 73369 3799921 ~ 3802530 (+)
G217569 NA non-coding downstream 434 3876550 ~ 3876779 (+)
G217570 NA non-coding downstream 9704 3885820 ~ 3886047 (+)
G217572 NA non-coding downstream 11368 3887484 ~ 3887700 (+)
G217609 NA non-coding downstream 82604 3958720 ~ 3959542 (+)
G217619 NA non-coding downstream 113220 3989336 ~ 3992796 (+)
LOC110520752 LOC106606080 other upstream 331421 3534519 ~ 3556267 (+)
G217146 NA other upstream 394363 3480316 ~ 3481536 (+)
G216673 NA other upstream 767666 3106354 ~ 3108233 (+)
G216640 LOC106606088 other upstream 834382 3039986 ~ 3041517 (+)
G217809 LOC106593792 other downstream 266527 4142643 ~ 4143089 (+)
G217870 NA other downstream 421440 4297556 ~ 4302856 (+)
G217896 NA other downstream 575638 4451754 ~ 4452556 (+)
G218309 NA other downstream 1060981 4937097 ~ 4939894 (+)
G218293 NA other downstream 1068887 4945003 ~ 4961450 (+)

Expression


Co-expression Network