Gene
RNA
| Item | Value |
|---|---|
| gene id | G217572 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 3887484 ~ 3887700 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU247888 | True | 217 | lncRNA | 0.51 | 1 | 3887484 | 3887700 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507394 | LOC106595324 | coding | upstream | 12619 | 3854447 ~ 3874865 (+) |
| LOC110493962 | pgcp | coding | upstream | 83760 | 3754666 ~ 3803724 (+) |
| LOC110493965 | LOC106573899 | coding | upstream | 133189 | 3738335 ~ 3754296 (+) |
| LOC110507370 | LOC106606027 | coding | upstream | 153788 | 3725954 ~ 3733696 (+) |
| LOC110520760 | LOC106606028 | coding | upstream | 179707 | 3558280 ~ 3707777 (+) |
| LOC118964350 | NA | coding | downstream | 10526 | 3898226 ~ 3910037 (+) |
| LOC118944821 | LOC106584755 | coding | downstream | 29291 | 3916991 ~ 3924440 (+) |
| LOC110520766 | LOC106584755 | coding | downstream | 77758 | 3965458 ~ 3968265 (+) |
| LOC110506729 | LOC106584755 | coding | downstream | 135275 | 4022975 ~ 4025061 (+) |
| LOC110512888 | ctnnb1 | coding | downstream | 209049 | 4096749 ~ 4135152 (+) |
| G217570 | NA | non-coding | upstream | 1437 | 3885820 ~ 3886047 (+) |
| G217569 | NA | non-coding | upstream | 10705 | 3876550 ~ 3876779 (+) |
| G217568 | NA | non-coding | upstream | 11368 | 3875899 ~ 3876116 (+) |
| G217554 | NA | non-coding | upstream | 12300 | 3874943 ~ 3875184 (+) |
| G217552 | NA | non-coding | upstream | 36444 | 3850818 ~ 3851040 (+) |
| G217609 | NA | non-coding | downstream | 71020 | 3958720 ~ 3959542 (+) |
| G217619 | NA | non-coding | downstream | 101636 | 3989336 ~ 3992796 (+) |
| G217732 | NA | non-coding | downstream | 170384 | 4058084 ~ 4058476 (+) |
| G217742 | NA | non-coding | downstream | 180559 | 4068259 ~ 4068489 (+) |
| G217761 | NA | non-coding | downstream | 202647 | 4090347 ~ 4091041 (+) |
| LOC110520752 | LOC106606080 | other | upstream | 343006 | 3534519 ~ 3556267 (+) |
| G217146 | NA | other | upstream | 405948 | 3480316 ~ 3481536 (+) |
| G216673 | NA | other | upstream | 779251 | 3106354 ~ 3108233 (+) |
| G216640 | LOC106606088 | other | upstream | 845967 | 3039986 ~ 3041517 (+) |
| G217809 | LOC106593792 | other | downstream | 254943 | 4142643 ~ 4143089 (+) |
| G217870 | NA | other | downstream | 409856 | 4297556 ~ 4302856 (+) |
| G217896 | NA | other | downstream | 564054 | 4451754 ~ 4452556 (+) |
| G218309 | NA | other | downstream | 1049397 | 4937097 ~ 4939894 (+) |
| G218293 | NA | other | downstream | 1057303 | 4945003 ~ 4961450 (+) |
