G217678


Basic Information

Item Value
gene id G217678
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3943641 ~ 3950737 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU248024
CCTAAAACATATTTGTGCAGTTCATTtatacattgaaatgacgtaggtAGATTCTGGTAGTCCTGACTCCTGGTAGGCTGCTTGTaggtgatagacagtcctctccagCCTGGTGTCAGTATCCCATTGGTTCTCGACAGAGTTCTGGAGCCCATCCCAAAGGGTTTTGAGTGTGTGCGTATATTTATGGGTTTCCAGTGTAGTTAGTatatagagtaacagagagagggggaaggtataACACAGAGTACAAGCCAAAATTGCATGGTTAAGCCCAGGCAGACAACAGTCAGTGAATGcgtcattacatgttttaatatgttattacattATACAATGGAtgcgaaatggcattctgagataacatcactacacacagttcatacacgtaatgttagctagctagccagccatcgAATTTCAGCTGGCTAGCCAACAGCATGCtttaactagcaatacaaactgattgccatagctagctaaagttaaccaaatcgattcaatgttagctagttagctagctaacattaggctataactagcaatgcgaaatggcattctgagaaaacATCATTAACATTTCACACACTTCATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248024 True 597 lncRNA 0.47 3 3943641 3950737

Neighbor

gene id symbol gene type direction distance location
LOC110507329 LOC106606059 coding downstream 217946 3719700 ~ 3725695 (-)
LOC110507312 LOC106595913 coding downstream 318541 3621822 ~ 3625100 (-)
LOC118944808 NA coding downstream 705622 3237475 ~ 3238019 (-)
LOC110506836 LOC106605978 coding downstream 780718 3152009 ~ 3162923 (-)
LOC118936609 LOC106605979 coding downstream 823530 3106571 ~ 3120111 (-)
LOC110506742 LOC106584706 coding upstream 42277 3993014 ~ 3998119 (-)
LOC110506736 LOC106584706 coding upstream 78355 4029092 ~ 4039160 (-)
LOC110505077 ulk4 coding upstream 184569 4135306 ~ 4354126 (-)
LOC118944827 cck-l coding upstream 502754 4453491 ~ 4456931 (-)
LOC118944829 LOC106606066 coding upstream 584746 4535483 ~ 4553394 (-)
G217654 NA non-coding downstream 57618 3885729 ~ 3886023 (-)
G217652 NA non-coding downstream 64253 3879149 ~ 3879388 (-)
G217543 NA non-coding downstream 99124 3844095 ~ 3844517 (-)
G217539 NA non-coding downstream 106310 3837130 ~ 3837331 (-)
G217469 NA non-coding downstream 235878 3706954 ~ 3707763 (-)
G217667 NA non-coding upstream 38631 3989368 ~ 3990519 (-)
G217729 NA non-coding upstream 101193 4051930 ~ 4052145 (-)
G217733 NA non-coding upstream 107351 4058088 ~ 4058381 (-)
G217734 NA non-coding upstream 110013 4060750 ~ 4061032 (-)
G217743 NA non-coding upstream 117530 4068267 ~ 4068540 (-)
G217459 NA other downstream 254337 3686402 ~ 3689304 (-)
G217261 NA other downstream 605061 3338186 ~ 3338580 (-)
G216902 LOC106606079 other downstream 883897 3046005 ~ 3059744 (-)
G216811 NA other downstream 1205174 2736861 ~ 2738467 (-)
G216059 NA other downstream 1818289 2124176 ~ 2125352 (-)
G218073 LOC106605488 other upstream 488359 4439096 ~ 4440437 (-)
LOC118944839 LOC106573494 other upstream 693233 4634932 ~ 4648920 (-)
G219200 NA other upstream 819613 4770350 ~ 4772051 (-)
G219290 LOC106593286 other upstream 1057347 5008084 ~ 5009406 (-)

Expression


Co-expression Network