G217769


Basic Information

Item Value
gene id G217769
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 4098328 ~ 4098646 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU248122
CTACATGTTGAATCATTTCATTATACACAGTTTAATGTGTGCTATTTCATAACCTGTAAGGCTCTGGAAATGTTCATAGTTATTGGTGGAACAGACACATTTATTGAACAGAAAATAACCATCATCTGGATTCCATGAATGTACAATTATCTATGACCATTGATTCCTCATACATGTTTGAagtgttttctgtttgtttctCTATTAAGCCTCTGTAGTCCTTGTCAATAACATATATATCATTATGGTCTATGATTTACTGTATCCAAATACAGTGTCTTATTGAAAGATGCACTATATTCTCCATCACATCAAACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248122 True 319 lncRNA 0.32 1 4098328 4098646

Neighbor

gene id symbol gene type direction distance location
LOC110506729 LOC106584755 coding upstream 73267 4022975 ~ 4025061 (+)
LOC110520766 LOC106584755 coding upstream 130063 3965458 ~ 3968265 (+)
LOC118944821 LOC106584755 coding upstream 173888 3916991 ~ 3924440 (+)
LOC118964350 NA coding upstream 188291 3898226 ~ 3910037 (+)
LOC110507394 LOC106595324 coding upstream 223463 3854447 ~ 3874865 (+)
LOC110510956 LOC106605488 coding downstream 283848 4382494 ~ 4448908 (+)
LOC110518117 LOC106575761 coding downstream 415677 4514323 ~ 4531079 (+)
ano10a ano10 coding downstream 552528 4651174 ~ 4697029 (+)
LOC118936613 LOC106573598 coding downstream 665967 4764613 ~ 4770261 (+)
LOC118944843 LOC106574283 coding downstream 731212 4829858 ~ 4834588 (+)
G217761 NA non-coding upstream 7287 4090347 ~ 4091041 (+)
G217742 NA non-coding upstream 29839 4068259 ~ 4068489 (+)
G217732 NA non-coding upstream 39852 4058084 ~ 4058476 (+)
G217619 NA non-coding upstream 105532 3989336 ~ 3992796 (+)
G217609 NA non-coding upstream 138786 3958720 ~ 3959542 (+)
G217777 NA non-coding downstream 21366 4120012 ~ 4120475 (+)
G217868 NA non-coding downstream 195920 4294566 ~ 4294843 (+)
G217870 NA non-coding downstream 198910 4297556 ~ 4302856 (+)
G217877 NA non-coding downstream 226579 4325225 ~ 4325722 (+)
G217903 NA non-coding downstream 268478 4367124 ~ 4367347 (+)
LOC110507370 LOC106606027 other upstream 369172 3725954 ~ 3733696 (+)
LOC110520752 LOC106606080 other upstream 553850 3534519 ~ 3556267 (+)
G217146 NA other upstream 616792 3480316 ~ 3481536 (+)
G216673 NA other upstream 990095 3106354 ~ 3108233 (+)
G216640 LOC106606088 other upstream 1056811 3039986 ~ 3041517 (+)
G217809 LOC106593792 other downstream 43997 4142643 ~ 4143089 (+)
G217896 NA other downstream 353108 4451754 ~ 4452556 (+)
G218309 NA other downstream 838451 4937097 ~ 4939894 (+)
G218293 NA other downstream 846357 4945003 ~ 4961450 (+)

Expression


Co-expression Network