G217877


Basic Information

Item Value
gene id G217877
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 4325225 ~ 4325722 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU248258
gagagagagagagacagcaagagaaagacagacagcgagagagagagagagaaagagggctcTAGGTTCTGATATAGTTGAGGTGCTGAGTAGGAGGACACCTGCACTGATTGACAAGCTGCTAGAGGGCGAGTGAGGAGTTAAGgaatctgcgtcccaaatggcaccctattctgtacatagtgcactacttttgaccagagtccacgtagtgcactatatagggaatagggtgccatttgggacagacccGAAGAGTGAACATAGTGAGGGGGAACATTCCAGTCAGAAAGGCCTTGTTGTGTCAGTAGAACAAGTCAACCAGAAACGAATACAACTCAAGTCAAGATACTCCACACAGCACAGCAGCCTCAaggtttctcttctctctccacacaaCAACCATAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248258 True 408 lncRNA 0.48 2 4325225 4325722

Neighbor

gene id symbol gene type direction distance location
LOC110512888 ctnnb1 coding upstream 190073 4096749 ~ 4135152 (+)
LOC110506729 LOC106584755 coding upstream 300164 4022975 ~ 4025061 (+)
LOC110520766 LOC106584755 coding upstream 356960 3965458 ~ 3968265 (+)
LOC118944821 LOC106584755 coding upstream 400785 3916991 ~ 3924440 (+)
LOC118964350 NA coding upstream 415188 3898226 ~ 3910037 (+)
LOC110510956 LOC106605488 coding downstream 56772 4382494 ~ 4448908 (+)
LOC110518117 LOC106575761 coding downstream 188601 4514323 ~ 4531079 (+)
ano10a ano10 coding downstream 325452 4651174 ~ 4697029 (+)
LOC118936613 LOC106573598 coding downstream 438891 4764613 ~ 4770261 (+)
LOC118944843 LOC106574283 coding downstream 504136 4829858 ~ 4834588 (+)
G217870 NA non-coding upstream 22369 4297556 ~ 4302856 (+)
G217868 NA non-coding upstream 30382 4294566 ~ 4294843 (+)
G217777 NA non-coding upstream 204750 4120012 ~ 4120475 (+)
G217769 NA non-coding upstream 226579 4098328 ~ 4098646 (+)
G217761 NA non-coding upstream 234184 4090347 ~ 4091041 (+)
G217903 NA non-coding downstream 41402 4367124 ~ 4367347 (+)
G217907 NA non-coding downstream 45072 4370794 ~ 4371111 (+)
G217916 NA non-coding downstream 58929 4384651 ~ 4385560 (+)
G217921 NA non-coding downstream 64087 4389809 ~ 4390383 (+)
G217927 NA non-coding downstream 80788 4406510 ~ 4406927 (+)
G217809 LOC106593792 other upstream 182136 4142643 ~ 4143089 (+)
LOC110507370 LOC106606027 other upstream 596069 3725954 ~ 3733696 (+)
LOC110520752 LOC106606080 other upstream 780747 3534519 ~ 3556267 (+)
G217146 NA other upstream 843689 3480316 ~ 3481536 (+)
G217896 NA other downstream 126032 4451754 ~ 4452556 (+)
G218309 NA other downstream 611375 4937097 ~ 4939894 (+)
G218293 NA other downstream 619281 4945003 ~ 4961450 (+)
LOC110507709 LOC106574077 other downstream 692972 5018589 ~ 5026840 (+)
G218301 NA other downstream 999705 5325427 ~ 5326009 (+)

Expression


Co-expression Network