G217916


Basic Information

Item Value
gene id G217916
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 4384651 ~ 4385560 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU248310
ataagagacagcagtctatcacagtgccctctgtttcgtcaccaaagccccatatactacccaccactgcgacctgtatgctctcgttggctggccctcgcttcatactcgtcgccaaacccactggctccaggtcatctacaagtctttgctaggtaaagccccaccttatctcagttcactggtcaccatagcagcacccacccatagca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248310 True 212 lncRNA 0.53 2 4384651 4385560

Neighbor

gene id symbol gene type direction distance location
LOC110512888 ctnnb1 coding upstream 249499 4096749 ~ 4135152 (+)
LOC110506729 LOC106584755 coding upstream 359590 4022975 ~ 4025061 (+)
LOC110520766 LOC106584755 coding upstream 416386 3965458 ~ 3968265 (+)
LOC118944821 LOC106584755 coding upstream 460211 3916991 ~ 3924440 (+)
LOC118964350 NA coding upstream 474614 3898226 ~ 3910037 (+)
LOC110518117 LOC106575761 coding downstream 128763 4514323 ~ 4531079 (+)
ano10a ano10 coding downstream 265614 4651174 ~ 4697029 (+)
LOC118936613 LOC106573598 coding downstream 379053 4764613 ~ 4770261 (+)
LOC118944843 LOC106574283 coding downstream 444298 4829858 ~ 4834588 (+)
LOC110507681 sbp1 coding downstream 589487 4975047 ~ 4983487 (+)
G217907 NA non-coding upstream 13540 4370794 ~ 4371111 (+)
G217903 NA non-coding upstream 17304 4367124 ~ 4367347 (+)
G217877 NA non-coding upstream 58929 4325225 ~ 4325722 (+)
G217870 NA non-coding upstream 81795 4297556 ~ 4302856 (+)
G217868 NA non-coding upstream 89808 4294566 ~ 4294843 (+)
G217921 NA non-coding downstream 4249 4389809 ~ 4390383 (+)
G217927 NA non-coding downstream 20950 4406510 ~ 4406927 (+)
G217932 NA non-coding downstream 34974 4420534 ~ 4421294 (+)
G217939 NA non-coding downstream 56986 4442546 ~ 4443148 (+)
G217940 NA non-coding downstream 59726 4445286 ~ 4445672 (+)
G217809 LOC106593792 other upstream 241562 4142643 ~ 4143089 (+)
LOC110507370 LOC106606027 other upstream 655495 3725954 ~ 3733696 (+)
LOC110520752 LOC106606080 other upstream 840173 3534519 ~ 3556267 (+)
G217146 NA other upstream 903115 3480316 ~ 3481536 (+)
G217896 NA other downstream 66194 4451754 ~ 4452556 (+)
G218309 NA other downstream 551537 4937097 ~ 4939894 (+)
G218293 NA other downstream 559443 4945003 ~ 4961450 (+)
LOC110507709 LOC106574077 other downstream 633134 5018589 ~ 5026840 (+)
G218301 NA other downstream 939867 5325427 ~ 5326009 (+)

Expression


Co-expression Network