G218196


Basic Information

Item Value
gene id G218196
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 4733765 ~ 4735372 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU248664
CGGGAGGAAAGGAACTGGATGTTCAAGGAGCCAAAATATCATCATCAGTCACGGCTTGACAAAACACACAGTCTGTTCtgctgggaaacacagtaaccaGGCCTGGTCTTTACAGACTGTCTGTTCTGCTGGGAAACACAGAAACCAGGCCTGGTCTTTACAGACTGTCTGTTCTGCTGGGAAACACAGTGACCAGgtctggtctttacagactgTCTGTTCTGCTGGAGAACACAGTAACCAGGCCTGGTCTTTACAGACTGTCTGTTCTGCTGGGAAACACAGAAACCAGGCCTGGTCTTTACAGACTGTCTGTTCTGCTGGGGAACATAAAGACCAGGCCTGGTTCTACAGACTGTCTGTTCtgctgggaaacacagtaaccaGGCCTGGTCTTTACAGACTGTCTGTTCtgctgggaaacacagtaaccaGGCCTGGTCTTTACAGACTGTCTGTTCTGCTGGGAAACATAGAACCAGGCCTGGTCTTTACAGACAGTCTGTTCTGCTGGGAAACATAGAACCAGGCCTGGTCTTTACAGACTGTCTGTTCtgctgggaaacacagtaaccaGGCCTGGTCTTTACAGACTGTCTGTTCTGCTGGGAAACATAGAACCAGGCCTGGTCTTTACAGACTGTCTGTTCtgctgggaaacacagtaaccaGGCCTGGTCTTCACAGACTGTCGGTTCTGCTGGGAAACACAGAAACCAGGCCTGGTCTTTACAGACCGCCTGTTCTGCTGGGGAACATAGAACCAGGCCTGGTTTTTACAGACTGTCTGTTCtgctgggaaacacagtaaccaGGCCTGGTCTTTACAGACTGTCTGTTCTGCTGGGAAACATAGAACCAGGCCTGGTCTTTACAGACTGTCTGTTCtgctgggaaacacagtaaccaGGCCTGGTCTTCACAGACTGTCGGTTCTGCTGGGAAACACAGAAACCAGGCCTGGTCTTTACAGACCGCCTGTTCTGCTGGGGAACATAGAACCAAGCCTGGTTTTTACAGACTGTCTGTTCtgctgggaaacacagtaaccaGGCCTGGTCTTTACAGACTGTCTGTTCTGCTGGGGAACATAGAACCAGGCCTGGTCTTTACAGACTGCGGTCTAGTTCAAACGGAGCAGATGGACTGTCCCCTACACTGTTatgtgcatatgacaaataaactgCTGTCATGCCCTGCTAGAAAGAGACAGCAAATTCAGAGAGTAAATGGAGGGCTGTCAGGCCTATATTCTATGTGGCTGTGCAATCCTTATTTAGCCCACAGTATAAATCACAGTAGATCATTTGTTCAAATAAAAaagatagcagcagcagcacattTCCTGAGTCTAAAAATACTGAGATGGAAAGATAAACAATGAGAGTAGCTAGTAGAGACATGACCTTTTACTGGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106594294, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248664 True 1417 lncRNA 0.44 2 4733765 4735372

Neighbor

gene id symbol gene type direction distance location
ano10a ano10 coding upstream 36736 4651174 ~ 4697029 (+)
LOC110518117 LOC106575761 coding upstream 202686 4514323 ~ 4531079 (+)
LOC110510956 LOC106605488 coding upstream 284857 4382494 ~ 4448908 (+)
LOC110512888 ctnnb1 coding upstream 598613 4096749 ~ 4135152 (+)
LOC110506729 LOC106584755 coding upstream 708704 4022975 ~ 4025061 (+)
LOC118936613 LOC106573598 coding downstream 29241 4764613 ~ 4770261 (+)
LOC118944843 LOC106574283 coding downstream 94486 4829858 ~ 4834588 (+)
LOC110507681 sbp1 coding downstream 239675 4975047 ~ 4983487 (+)
LOC118936614 LOC106574548 coding downstream 249333 4984705 ~ 4999197 (+)
LOC110516306 LOC105018869 coding downstream 263947 4999319 ~ 5017869 (+)
G218195 NA non-coding upstream 559 4730805 ~ 4733206 (+)
G218181 NA non-coding upstream 20359 4712286 ~ 4713406 (+)
G218164 NA non-coding upstream 63639 4669779 ~ 4670126 (+)
G218163 NA non-coding upstream 64818 4668500 ~ 4668947 (+)
G218107 LOC106606051 non-coding upstream 173845 4559509 ~ 4559920 (+)
G218228 NA non-coding downstream 43908 4779280 ~ 4779656 (+)
G218259 NA non-coding downstream 127220 4862592 ~ 4869562 (+)
G218274 NA non-coding downstream 157898 4893270 ~ 4893586 (+)
G218286 NA non-coding downstream 179776 4915148 ~ 4922149 (+)
G217896 NA other upstream 281209 4451754 ~ 4452556 (+)
G217870 NA other upstream 430909 4297556 ~ 4302856 (+)
G217809 LOC106593792 other upstream 590676 4142643 ~ 4143089 (+)
LOC110507370 LOC106606027 other upstream 1004609 3725954 ~ 3733696 (+)
LOC110520752 LOC106606080 other upstream 1189287 3534519 ~ 3556267 (+)
G218309 NA other downstream 201725 4937097 ~ 4939894 (+)
G218293 NA other downstream 209631 4945003 ~ 4961450 (+)
LOC110507709 LOC106574077 other downstream 283322 5018589 ~ 5026840 (+)
G218301 NA other downstream 590055 5325427 ~ 5326009 (+)
G218465 NA other downstream 724720 5460092 ~ 5561271 (+)

Expression


Co-expression Network