G219200


Basic Information

Item Value
gene id G219200
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 4770350 ~ 4772051 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU250017
GAAATCCATGCAATCCAATTAACTCAAACAACTAAGACACAGAATGAAAACAAACATGTTGTCCTCGCATCTTCCTCGTGGTATGTTTCTGTAGCCTACTAGTCTGCTATATGGGGATTAATGACACaaagggacgtgtgtgtgtgtgtatgacttcTTTATTAGATGGGTGTCTGATAAAGAAGCTAAACCCAGATGACTAAATCAACCCAGGGGTTTCTGTTCAGCACCTTGGACAGCACCTTCCACTACAAGCGCAGTACATAGGTTATCTGCCTCTCTCTTGACCGAACAGTAGATTATCCGTTCCGCCTAGCCCTAGGTGGAAAACACAACAATTAGAAACAGACATGGCAAAATCAGCAGCTATCTTGCTGGTGTTCATTTCCTTTTTGTACATCCTATCTCAATCAGCCCATGTGGTTGCAGGATGGACAGACGAAAGGCTACCAAAGGCTGAAGTTATAGAGGACTCTAGGGAACTGCTGGGTGTCCTTCATAACGTCCTGGAGAAACTCCAAAACAGAAGAATGGCTGTGTGGGAAAGAAGACAAAGCCACCTTCCTAGTTGTATTGTCGGTGACTACTGCACAGTGAAAAAGGGACCACGGTACGGCCAACTATGTGACTGTCCAAGAGGATCAAAGTGCAACCTCTTCTTCCTAAAgtgtttgtgatttatttttgTTATGGTATTAGTTCATTTATTTATGTCTGAAATATAGTAGGATTTTGAAATTTCGCTTCGCTACCTTCTAATATATATCCTTCTTCTGACCTGTTCCATCCATGTGTTCTTTAATTTGCCTCTCATTCTACCATTCTGGTTGTTGTGCATTCAGCACAGATATGAAGGTAAGCTCTGTAAATATGAAAAAGAGAGGctcttttttaaataaaaatgttgattAATAAA
>TU250018
GAAATCCATGCAATCCAATTAACTCAAACAACTAAGACACAGAATGAAAACAAACATGTTGTCCTCGCATCTTCCTCGTGGTATGTTTCTGTAGCCTACTAGTCTGCTATATGGGGATTAATGACACaaagggacgtgtgtgtgtgtgtatgacttcTTTATTAGATGGGTGTCTGATAAAGAAGCTAAACCCAGATGACTAAATCAACCCAGGGGTTTCTGTTCAGCACCTTGGACAGCACCTTCCACTACAAGCGCAGTACATAGGTTATCTGCCTCTCTCTTGACCGAACAGTAGATTATCCGTTCCGCCTAGCCCTAGGTGGAAAACACAACAATTAGAAACAGACATGGCAAAATCAGCAGCTATCTTGCTGGTGTTCATTTCCTTTTTGTACATCCTATCTCAATCAGCCCATGTGGTTGCAGGATGGACAGACGAAAGGCTACCAAAGGCTGAAGTTATAGAGGACTCTAGGGAACTGCTGGGTGTCCTTCATAACGTCCTGGAGAAACTCCAAAACAGAAGAATGGCTGTGTGGGAAAGAAGACAAAGCCACCTTCCTAGTGTAAGCAAGCTATTTCAGACACCACAGTGTATTGTCGGTGACTACTGCACAGTGAAAAAGGGACCACGGTACGGCCAACTATGTGACTGTCCAAGAGGATCAAAGTGCAACCTCTTCTTCCTAAAgtgtttgtgatttatttttgTTATGGTATTAGTTCATTTATTTATGTCTGAAATATAGTAGGATTTTGAAATTTCGCTTCGCTACCTTCTAATATATATCCTTCTTCTGACCTGTTCCATCCATGTGTTCTTTAATTTGCCTCTCATTCTACCATTCTGGTTGTTGTGCATTCAGCACAGATATGAAGGTAAGCTCTGTAAATATGAAAAAGAGAGGctcttttttaaataaaaatgttgattAATAAA

Function

NR:

description
PREDICTED: cocaine- and amphetamine-regulated transcript protein-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU250017 False 916 TUCP 0.34 3 4770350 4772051
TU250018 True 943 TUCP 0.44 3 4770350 4772051

Neighbor

gene id symbol gene type direction distance location
LOC110507598 snrk coding downstream 7213 4704539 ~ 4763137 (-)
LOC110507662 NA coding downstream 11567 4757547 ~ 4758783 (-)
LOC118944839 LOC106573494 coding downstream 121430 4634932 ~ 4648920 (-)
LOC118944831 NA coding downstream 175137 4567017 ~ 4595235 (-)
LOC110507551 LOC106606051 coding downstream 207034 4555685 ~ 4563316 (-)
plekho1b LOC106606096 coding upstream 80652 4852703 ~ 4892517 (-)
LOC110518085 LOC106593045 coding upstream 165378 4937429 ~ 4943500 (-)
LOC118944848 NA coding upstream 235280 5006952 ~ 5007885 (-)
LOC110507711 LOC106574107 coding upstream 270845 5042896 ~ 5054330 (-)
LOC110534068 LOC106574842 coding upstream 458289 5230340 ~ 5312338 (-)
G219201 NA non-coding downstream 97 4769162 ~ 4770253 (-)
G219144 NA non-coding downstream 73327 4693974 ~ 4697023 (-)
G219153 NA non-coding downstream 101006 4668757 ~ 4669344 (-)
G219109 NA non-coding downstream 200519 4569421 ~ 4569831 (-)
G219208 NA non-coding upstream 6956 4779007 ~ 4837111 (-)
G219236 NA non-coding upstream 126572 4898623 ~ 4898848 (-)
G219273 LOC106606069 non-coding upstream 199352 4971403 ~ 4974116 (-)
G219279 NA non-coding upstream 212098 4984149 ~ 4984514 (-)
LOC118944829 LOC106606066 other downstream 229909 4535483 ~ 4553394 (-)
G218073 LOC106605488 other downstream 329913 4439096 ~ 4440437 (-)
G217459 NA other downstream 1081046 3686402 ~ 3689304 (-)
G217261 NA other downstream 1431770 3338186 ~ 3338580 (-)
G219290 LOC106593286 other upstream 236033 5008084 ~ 5009406 (-)
G219500 NA other upstream 915674 5687725 ~ 5688291 (-)
G219591 NA other upstream 976107 5748158 ~ 5748714 (-)
G219592 NA other upstream 979673 5751724 ~ 5752094 (-)
LOC110534138 LOC106605946 other upstream 1557551 6329602 ~ 6349701 (-)

Expression


Co-expression Network