G219208


Basic Information

Item Value
gene id G219208
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 4779007 ~ 4837111 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU250028
tcacagtgcaggtgcattcatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaagaggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcacaaagttcaagggggccaaatactttcgcaaggcactgtatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactccctagaaaggccagaacctaggaagaaacctagagaggaaccaggctatgaggggtggccactcctcttctggctgtgatgTGTCCCTTAGAGTAATAATAGCACAAAGCCAATATACCCCACGTATTCCATCTTGTTTTGACTTCATACAAACTAATATGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU250028 True 630 lncRNA 0.41 2 4779007 4837111

Neighbor

gene id symbol gene type direction distance location
LOC110507598 snrk coding downstream 15870 4704539 ~ 4763137 (-)
LOC110507662 NA coding downstream 20224 4757547 ~ 4758783 (-)
LOC118944839 LOC106573494 coding downstream 130087 4634932 ~ 4648920 (-)
LOC118944831 NA coding downstream 183794 4567017 ~ 4595235 (-)
LOC110507551 LOC106606051 coding downstream 215691 4555685 ~ 4563316 (-)
plekho1b LOC106606096 coding upstream 15592 4852703 ~ 4892517 (-)
LOC110518085 LOC106593045 coding upstream 100318 4937429 ~ 4943500 (-)
LOC118944848 NA coding upstream 170220 5006952 ~ 5007885 (-)
LOC110507711 LOC106574107 coding upstream 205785 5042896 ~ 5054330 (-)
LOC110534068 LOC106574842 coding upstream 393229 5230340 ~ 5312338 (-)
G219201 NA non-coding downstream 8754 4769162 ~ 4770253 (-)
G219144 NA non-coding downstream 81984 4693974 ~ 4697023 (-)
G219153 NA non-coding downstream 109663 4668757 ~ 4669344 (-)
G219109 NA non-coding downstream 209176 4569421 ~ 4569831 (-)
G219236 NA non-coding upstream 61512 4898623 ~ 4898848 (-)
G219273 LOC106606069 non-coding upstream 134292 4971403 ~ 4974116 (-)
G219279 NA non-coding upstream 147038 4984149 ~ 4984514 (-)
G219283 NA non-coding upstream 152381 4989492 ~ 4990146 (-)
G219200 NA other downstream 6956 4770350 ~ 4772051 (-)
LOC118944829 LOC106606066 other downstream 238566 4535483 ~ 4553394 (-)
G218073 LOC106605488 other downstream 338570 4439096 ~ 4440437 (-)
G217459 NA other downstream 1089703 3686402 ~ 3689304 (-)
G219290 LOC106593286 other upstream 170973 5008084 ~ 5009406 (-)
G219500 NA other upstream 850614 5687725 ~ 5688291 (-)
G219591 NA other upstream 911047 5748158 ~ 5748714 (-)
G219592 NA other upstream 914613 5751724 ~ 5752094 (-)
LOC110534138 LOC106605946 other upstream 1492491 6329602 ~ 6349701 (-)

Expression


Co-expression Network