Gene
RNA
| Item | Value |
|---|---|
| gene id | G218228 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 4779280 ~ 4779656 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU248699 | True | 355 | lncRNA | 0.35 | 2 | 4779280 | 4779656 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936613 | LOC106573598 | coding | upstream | 9985 | 4764613 ~ 4770261 (+) |
| ano10a | ano10 | coding | upstream | 82251 | 4651174 ~ 4697029 (+) |
| LOC110518117 | LOC106575761 | coding | upstream | 248201 | 4514323 ~ 4531079 (+) |
| LOC110510956 | LOC106605488 | coding | upstream | 330372 | 4382494 ~ 4448908 (+) |
| LOC110512888 | ctnnb1 | coding | upstream | 644128 | 4096749 ~ 4135152 (+) |
| LOC118944843 | LOC106574283 | coding | downstream | 50202 | 4829858 ~ 4834588 (+) |
| LOC110507681 | sbp1 | coding | downstream | 195391 | 4975047 ~ 4983487 (+) |
| LOC118936614 | LOC106574548 | coding | downstream | 205049 | 4984705 ~ 4999197 (+) |
| LOC110516306 | LOC105018869 | coding | downstream | 219663 | 4999319 ~ 5017869 (+) |
| LOC110507709 | LOC106574077 | coding | downstream | 238933 | 5018589 ~ 5026840 (+) |
| G218196 | NA | non-coding | upstream | 43908 | 4733765 ~ 4735372 (+) |
| G218195 | NA | non-coding | upstream | 46074 | 4730805 ~ 4733206 (+) |
| G218181 | NA | non-coding | upstream | 65874 | 4712286 ~ 4713406 (+) |
| G218164 | NA | non-coding | upstream | 109154 | 4669779 ~ 4670126 (+) |
| G218259 | NA | non-coding | downstream | 82936 | 4862592 ~ 4869562 (+) |
| G218274 | NA | non-coding | downstream | 113614 | 4893270 ~ 4893586 (+) |
| G218286 | NA | non-coding | downstream | 135492 | 4915148 ~ 4922149 (+) |
| G218306 | NA | non-coding | downstream | 149931 | 4929587 ~ 4929806 (+) |
| G218307 | NA | non-coding | downstream | 154176 | 4933832 ~ 4934075 (+) |
| G217896 | NA | other | upstream | 326724 | 4451754 ~ 4452556 (+) |
| G217870 | NA | other | upstream | 476424 | 4297556 ~ 4302856 (+) |
| G217809 | LOC106593792 | other | upstream | 636191 | 4142643 ~ 4143089 (+) |
| LOC110507370 | LOC106606027 | other | upstream | 1050124 | 3725954 ~ 3733696 (+) |
| LOC110520752 | LOC106606080 | other | upstream | 1234802 | 3534519 ~ 3556267 (+) |
| G218309 | NA | other | downstream | 157441 | 4937097 ~ 4939894 (+) |
| G218293 | NA | other | downstream | 165347 | 4945003 ~ 4961450 (+) |
| G218301 | NA | other | downstream | 545771 | 5325427 ~ 5326009 (+) |
| G218465 | NA | other | downstream | 680436 | 5460092 ~ 5561271 (+) |
