G218309


Basic Information

Item Value
gene id G218309
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 4937097 ~ 4939894 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU248792
CTGGATGTGAACTGTTTGGAACAATATTGGCTATTGACAAATTATATTTGAGAGGTTGTCACCATTGTAAAAATATGATTCATTGGTAACATGAAAGAATTCAGTTACTACTCAGTATCGGCAATCCTGGAAAGAGGCTGTAGAGTGCTGACTGCGTGGTAAGTGGACCACGCTGCTCTCTAGTGGCTCAATTATAATGGACACATTACCCTCTGCTGGTTACTCCTGCTCACTGCATGTCAGAAAACCTTACAGATAGAATAAGAGAATCACATTTATACAGTTTGAGGCAAAACACATTTTTGTTATTCAAATGAAGGTAACAACAGAAACAAAGCTTACATTTTATTTGAGATAGTCATTGTTGCTACTTTGCAAAATTACCTTGAAGATGATCCTCCCTTGAAAAACAGAATGACCATCAGTAGTTTCCCATTTCAGGAGTGAATTCCAAAAGACAACTACTCTTTACAGAGAACATTTAGTATAAACATGCTTTTACAGTGCCCTCAGGAAATAACCAGGTGAATACTTGGCAATGATTACCTGCAATCTCTAATGATGAAATATACTATTTACCTGCTTATTTCATAAACATGACACTCTAAAGTGTTAAACTGCAGTAAATGCATGATCACCAGTGTAATATTCATCCCAATGTACTAAGCTATCAAGTACAACACTCTCAACTGACATTCATATTATCAGGCAGAGGCATAATGCCCATAGGGGGCGCAGGGGAACGTGCCCCCTCAGATGTGTCCTGTTTATAcaactaaaaaaataaatagcctcctagcaattttatgaagttggctttagctagcccagattggttcccaatctcccaacctcataactagctataAAGTAGGCTATCAaacaagttagagtagctagcttgtctaactatcttagctggcatgtgtgctggcaaggttggtagactttagaaaagtgAGGAATTATtcaatgtactgaataagactcacattcctttcaatcctTTACCCAGATTTTTAGCAGAGATGTAGAGATGAATATTTAGTTTATTGAAAAAAAGAACCACCAATCAGGTGGATACAGACAGTTCAAAAAGTTTGCTTAAatatgcagaaaaatatacatatttttcacacaaaattaagcataatgatcatggctctagattgcaggaaaatgctttttcaggtgtttgaaaattgcTAAATTATCCAACCACTCCCCCAGCCATCCTCACATACTTTGTGCACATTCAGATTTTTGGGGTACATGACGCCCCTGTTAAACCTCAGATTTTTGGGGTACATGACGCCCCTGTTAAAGCTCAGATTTTTGGGGTACATGACGCCCCTGTTAAACCTCAGATTTTTGGGGTACATGACGCCCCTGTTAAACCTCAGATTTTTGGGGTACATGACGCCCCTGTTAAACCTCAGATTTTTGGGGTACATGACGCCCCTGTTAAACCTCAGATTTTTGGGGTACATGACGCCCCTGTTAACAAGGGTCAGAATTCTACAAGAATGACTGGCGATGGATGCTCCAAATAATTTGTTGGATATCTGATCTCCAGCATAGTGAGGTGAAAGGACTTTTTGTCCTGAGTTGAGTTCCTACAGGTCTGTTAGTCTTTCAGTCTGCAATCTCCAAGGTAAGCATGGACGCCCCAACCTGGTAACTACACATCACCCATGCATGTCTTTTTGAAGACTCCTTACAGGTAATTTTATATTGAGAGGTCAGAGAAGAGAGGCTTGAGGATTCCTTGGTACCAGTCGTCCAATCTGTTGATGCTGTTTGTCAGAGAGGTTTGGGGCTGTCCTTAGTTCATGAGTTCCCGGTTTTCAGATGTAGGGGGTTGTTCAGTCTTTCTCTATAGTTTGAAGATGGAGGGGGTTGTTCAGTCTTTCTCTATGGTTTGCAGGTGGAGGGGGTTGTTCAGTCTTTCTCTATGGTTTGAAGGTGGAGGGGGTTGTACAGTCTTTCTCTATAGTTTGCAAGTGGAGGGGGTTGCTCAGTCTTTCTCTATAGTTTGCAGGTGGAGGGGGTTGTTCAGTCTTTCTGTGTGGTTTTCAGATGGAGGGGGTTGTACAGTCTTTCTCTATAGTTTTCAGATGGAGGGGGTTCAGTTTTTCTCTATGGTTTTCAGGTGGAGGGGATTGTTCGGTTTTTCACTATAGTTTTCAGATGGCGGGGGTTGTACAGTCTTTCTCTATGGTTTTCAGGTGGAGGGGGTTGTACAGTCTTTCTCTATGGTTTTCAGATGGAGGGGGTTGTTCAGTCTTTTTCTATGGTTTTCAGATGGAGGGGGTTGTTCAGTCTTTCTCTATAGTTTTCAGATGGAGGGGGTTGTACAGTCTTTCTCTATGGTTTTCAGATGGAGGGGGTTGTTCAGTCTTTTTCTTTGTAACCCACCAGACGGGCACTCTCCTTCCAAAGCCTCTTGGCCACCGCATCATCCCTCCCCCCTGGGGCGGTCTCCGTCATGGCA

Function

NR:

description
PREDICTED: retinol dehydrogenase 13-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248792 True 2494 TUCP 0.42 3 4937097 4939894

Neighbor

gene id symbol gene type direction distance location
LOC118944843 LOC106574283 coding upstream 102509 4829858 ~ 4834588 (+)
LOC118936613 LOC106573598 coding upstream 167802 4764613 ~ 4770261 (+)
ano10a ano10 coding upstream 240068 4651174 ~ 4697029 (+)
LOC110518117 LOC106575761 coding upstream 406018 4514323 ~ 4531079 (+)
LOC110510956 LOC106605488 coding upstream 488189 4382494 ~ 4448908 (+)
LOC110507681 sbp1 coding downstream 35153 4975047 ~ 4983487 (+)
LOC118936614 LOC106574548 coding downstream 44811 4984705 ~ 4999197 (+)
LOC110516306 LOC105018869 coding downstream 59425 4999319 ~ 5017869 (+)
LOC110507709 LOC106574077 coding downstream 78695 5018589 ~ 5026840 (+)
LOC110507710 LOC106606072 coding downstream 87899 5027793 ~ 5039155 (+)
G218307 NA non-coding upstream 3022 4933832 ~ 4934075 (+)
G218306 NA non-coding upstream 7291 4929587 ~ 4929806 (+)
G218286 NA non-coding upstream 14948 4915148 ~ 4922149 (+)
G218274 NA non-coding upstream 43511 4893270 ~ 4893586 (+)
G218259 NA non-coding upstream 67535 4862592 ~ 4869562 (+)
G218300 NA non-coding downstream 49510 4989404 ~ 4991140 (+)
G218322 NA non-coding downstream 83367 5023261 ~ 5023608 (+)
G218325 NA non-coding downstream 103006 5042900 ~ 5044159 (+)
G218338 NA non-coding downstream 138218 5078112 ~ 5080045 (+)
G217896 NA other upstream 484541 4451754 ~ 4452556 (+)
G217870 NA other upstream 634241 4297556 ~ 4302856 (+)
G217809 LOC106593792 other upstream 794008 4142643 ~ 4143089 (+)
LOC110507370 LOC106606027 other upstream 1207941 3725954 ~ 3733696 (+)
LOC110520752 LOC106606080 other upstream 1392619 3534519 ~ 3556267 (+)
G218293 NA other downstream 5109 4945003 ~ 4961450 (+)
G218301 NA other downstream 385533 5325427 ~ 5326009 (+)
G218465 NA other downstream 520198 5460092 ~ 5561271 (+)
LOC110535491 LOC106606078 other downstream 593121 5533015 ~ 5627436 (+)

Expression


Co-expression Network