G219283


Basic Information

Item Value
gene id G219283
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 4989492 ~ 4990146 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU250114
CGATGACGACAAGAACTACCGGTCTTATCAGCGTAGCTAAATTAACCAGTATGACAAATTCTTTACTCTGGTGTTTTTGTATCCAATAGCTACCAGGTTAATAGCCGAGTACTGATGATGTTGTCACATGGTCAGTCGCCATAGCGAACTAGTTTCTCCAAGATATCACCAGGCCTCAATAGAGACCTCTGGGCATGGTGTTTCTAGAAGCACTGTGAccctacagtaacactgtctccaTGTTTGTAAAACATTGTCAGGGTGCCATGATGCCATCGTAAACCGAAGAGGGAGctaagagagaaaggaggaagtgACCAGAGGGAAATCACTGAGCTTGAAACTGAACTGCTGATTAAGTTTGGTGTGGTAGTCACatatacacatgcacgcacggacacacacatacagagctcAATTGGTCAAAGACCCTCTCTTCAACATTTTTATATtcgagtcatttagcagacgatcttatccagagcaacttacagtaatgAGAGCACACATTTTTATACTTTATTTGTACTGGTCCAACGTGGGAATGGAACCCATAACCctggccatgctctaccaactgagctacatggTCCCAAGTGGGAACGGAACCCATAACCctggccatgctctaccaactgagctacatggTCCCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250114 True 655 lncRNA 0.45 1 4989492 4990146

Neighbor

gene id symbol gene type direction distance location
LOC110518085 LOC106593045 coding downstream 45992 4937429 ~ 4943500 (-)
plekho1b LOC106606096 coding downstream 96975 4852703 ~ 4892517 (-)
LOC110507598 snrk coding downstream 226355 4704539 ~ 4763137 (-)
LOC110507662 NA coding downstream 230709 4757547 ~ 4758783 (-)
LOC118944839 LOC106573494 coding downstream 340572 4634932 ~ 4648920 (-)
LOC118944848 NA coding upstream 17185 5006952 ~ 5007885 (-)
LOC110507711 LOC106574107 coding upstream 52750 5042896 ~ 5054330 (-)
LOC110534068 LOC106574842 coding upstream 240194 5230340 ~ 5312338 (-)
LOC110535324 LOC106605869 coding upstream 333978 5324124 ~ 5333624 (-)
LOC110515205 ci023 coding upstream 343727 5333873 ~ 5335574 (-)
G219279 NA non-coding downstream 4978 4984149 ~ 4984514 (-)
G219273 LOC106606069 non-coding downstream 15376 4971403 ~ 4974116 (-)
G219236 NA non-coding downstream 90644 4898623 ~ 4898848 (-)
G219208 NA non-coding downstream 152381 4779007 ~ 4837111 (-)
G219284 NA non-coding upstream 1093 4991239 ~ 4991523 (-)
G219286 NA non-coding upstream 2773 4992919 ~ 4993607 (-)
G219296 NA non-coding upstream 21187 5011333 ~ 5016077 (-)
G219278 LOC106606056 non-coding upstream 34278 5024424 ~ 5025192 (-)
G219200 NA other downstream 217441 4770350 ~ 4772051 (-)
LOC118944829 LOC106606066 other downstream 449051 4535483 ~ 4553394 (-)
G218073 LOC106605488 other downstream 549055 4439096 ~ 4440437 (-)
G217459 NA other downstream 1300188 3686402 ~ 3689304 (-)
G219290 LOC106593286 other upstream 17938 5008084 ~ 5009406 (-)
G219500 NA other upstream 697579 5687725 ~ 5688291 (-)
G219591 NA other upstream 758012 5748158 ~ 5748714 (-)
G219592 NA other upstream 761578 5751724 ~ 5752094 (-)
LOC110534138 LOC106605946 other upstream 1339456 6329602 ~ 6349701 (-)

Expression


Co-expression Network