G219290 (LOC106593286)


Basic Information

Item Value
gene id G219290
gene name LOC106593286
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5008084 ~ 5009406 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU250121
GGTAGGACGgccctttttctctgcctctaGGTTTTCTGGGAAAAGGGTTTTTATGAAGGCAAATTCACTGCTCTGCATCAGCTCAATGATGTCGTTGAAGAGCACATCTCTGTTCCTCTCACAGAAGCCACTGACATCATAggacCTTGCCAGCGTAGTGGTGCACTATGAAGCCTTTATTCCAGCTGTTGAAGTGCTCATGGGAGCTGATTCCCGCTTGTAGCTTCTGGATCAGGGTCTGGTCTGCACCCTCCCCCTTAGCATGCATGGTGGCACACACATCGTCCAAGATACTCATGATGCCTGGGGGGTTCAGTTTGGACTCAATGAGGTCACACACGATTTTGTTGTTAAAGTACTCGATCGGCGTCCACTTGATCCCTTCCTGCACATATTCCTCCTGCTCAGCTTTTAACGTGAGCTCAATGAAAATCTGCTGCAGCTTCTCATTCACAAAGTTGATGCAGAACTGCTCAAAGCCGTTTTTCTATTAGTGTTAAATAGAGATGTGaaggaaaatgttatgtttgtgcttttctaataaccaattcgACTGGGTTGATGCAAGTTACTGGTGGATCATGCCTGGgaggaatcctcactatcagtataaGCAATGTGGCAGTACGCCCACAACCTTGTTTTGAGAAAGgaatatctcagtttcaaggtgtcagcttggagagaagaagccttgtgaggtattggtcgATCACAAGCATGAACCAAAAGTTAATGATGAATGAATAATAA

Function

NR:

description
PREDICTED: unconventional myosin-Ie-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250121 True 753 TUCP 0.48 5 5008084 5009406

Neighbor

gene id symbol gene type direction distance location
LOC118944848 NA coding downstream 199 5006952 ~ 5007885 (-)
LOC110518085 LOC106593045 coding downstream 64584 4937429 ~ 4943500 (-)
plekho1b LOC106606096 coding downstream 115567 4852703 ~ 4892517 (-)
LOC110507598 snrk coding downstream 244947 4704539 ~ 4763137 (-)
LOC110507662 NA coding downstream 249301 4757547 ~ 4758783 (-)
LOC110507711 LOC106574107 coding upstream 33490 5042896 ~ 5054330 (-)
LOC110534068 LOC106574842 coding upstream 220934 5230340 ~ 5312338 (-)
LOC110535324 LOC106605869 coding upstream 314718 5324124 ~ 5333624 (-)
LOC110515205 ci023 coding upstream 324467 5333873 ~ 5335574 (-)
LOC110535340 LOC106574784 coding upstream 342734 5352140 ~ 5355536 (-)
G219286 NA non-coding downstream 14477 4992919 ~ 4993607 (-)
G219284 NA non-coding downstream 16561 4991239 ~ 4991523 (-)
G219283 NA non-coding downstream 17938 4989492 ~ 4990146 (-)
G219279 NA non-coding downstream 23570 4984149 ~ 4984514 (-)
G219296 NA non-coding upstream 1927 5011333 ~ 5016077 (-)
G219278 LOC106606056 non-coding upstream 15018 5024424 ~ 5025192 (-)
G219276 NA non-coding upstream 16004 5025410 ~ 5026681 (-)
G219305 NA non-coding upstream 18131 5027537 ~ 5028024 (-)
G219307 NA non-coding upstream 20312 5029718 ~ 5029968 (-)
G219200 NA other downstream 236033 4770350 ~ 4772051 (-)
LOC118944839 LOC106573494 other downstream 359281 4634932 ~ 4648920 (-)
LOC118944829 LOC106606066 other downstream 467643 4535483 ~ 4553394 (-)
G218073 LOC106605488 other downstream 567647 4439096 ~ 4440437 (-)
G217459 NA other downstream 1318780 3686402 ~ 3689304 (-)
G219500 NA other upstream 678319 5687725 ~ 5688291 (-)
G219591 NA other upstream 738752 5748158 ~ 5748714 (-)
G219592 NA other upstream 742318 5751724 ~ 5752094 (-)
LOC110534138 LOC106605946 other upstream 1320196 6329602 ~ 6349701 (-)
G219820 LOC106605946 other upstream 1323562 6332968 ~ 6338813 (-)

Expression


Co-expression Network