G219305



Basic Information


Item Value
gene id G219305
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5027537 ~ 5028024 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU250146
CCTctaacaatttaaatgcaatacTCCATATTTCCCTCTAGCAATTGAAATGAGCTGAAACACTGACACCACTGTTTTTGTTTCAGGAAACCCACCGCCATGAGCGTCACTTCACATTTGCTACACACACTGGTTGTGAAACTATGGGTTTCCACAGAATAAACTAGCAAAGTGGTTTAATCACTTACCCATTTAGCATGTACTGGTCCCCCTGCTCCGTATAGGTCCCCATATCATCCACCCTGTGAGTGAGATCAGATGATTATTTCAGCACTGAATGGGTACCTCCAGGAACTAGTGTTTCTTGCAAAACAAGACAGCCTGCTGGCTCATCTGCCTTTCTCATGAGGAAGTCTGTtgatgtgggtgggtgtgtttgtgtggatgtgtgtctaTGTCAGTGAATTCACCCTCTTCCTGTCCCTACAGGTTTTTCTGCATTTCAGCAGGACCTGTTGTGGTTGCTTCCCTATTACCTAAGGCTAAGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU250146 True 488 lncRNA 0.51 1 5027537 5028024

Neighbor


gene id symbol gene type direction distance location
LOC118944848 NA coding downstream 19652 5006952 ~ 5007885 (-)
LOC110518085 LOC106593045 coding downstream 84037 4937429 ~ 4943500 (-)
plekho1b LOC106606096 coding downstream 135020 4852703 ~ 4892517 (-)
LOC110507598 snrk coding downstream 264400 4704539 ~ 4763137 (-)
LOC110507711 LOC106574107 coding upstream 14872 5042896 ~ 5054330 (-)
LOC110534068 LOC106574842 coding upstream 202316 5230340 ~ 5312338 (-)
LOC110535324 LOC106605869 coding upstream 296100 5324124 ~ 5333624 (-)
LOC110515205 ci023 coding upstream 305849 5333873 ~ 5335574 (-)
LOC110535340 LOC106574784 coding upstream 324116 5352140 ~ 5355536 (-)
G219276 NA non-coding downstream 856 5025410 ~ 5026681 (-)
G219278 LOC106606056 non-coding downstream 2345 5024424 ~ 5025192 (-)
G219296 NA non-coding downstream 11460 5011333 ~ 5016077 (-)
G219286 NA non-coding downstream 33930 4992919 ~ 4993607 (-)
G219307 NA non-coding upstream 1694 5029718 ~ 5029968 (-)
G219309 NA non-coding upstream 9093 5037117 ~ 5039155 (-)
G219310 NA non-coding upstream 13381 5041405 ~ 5041618 (-)
G219313 NA non-coding upstream 28164 5056188 ~ 5100722 (-)
G219290 LOC106593286 other downstream 18131 5008084 ~ 5009406 (-)
G219200 NA other downstream 255486 4770350 ~ 4772051 (-)
LOC118944839 LOC106573494 other downstream 378734 4634932 ~ 4648920 (-)
LOC118944829 LOC106606066 other downstream 487096 4535483 ~ 4553394 (-)
G218073 LOC106605488 other downstream 587100 4439096 ~ 4440437 (-)
G219500 NA other upstream 659701 5687725 ~ 5688291 (-)
G219591 NA other upstream 720134 5748158 ~ 5748714 (-)
G219592 NA other upstream 723700 5751724 ~ 5752094 (-)
LOC110534138 LOC106605946 other upstream 1301578 6329602 ~ 6349701 (-)
G219820 LOC106605946 other upstream 1304944 6332968 ~ 6338813 (-)

Expression



Co-expression Network