G218361


Basic Information

Item Value
gene id G218361
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5146564 ~ 5146835 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU248856
CAGTGGAGACCCTGCTGACACAGTGGAGACCCTGTTGACACACTGGAGACCCTGCTGACACAGTGGAGACCCTGTTGACACAGTGGAGACACTGCTGACACAGTGGAGACCCTGCTGACACAGTGCAGACCCTGCTGACACAGTGGAGACCCTGTTGACACAGTGGAGACCCTGCTGACACAGTGCAGACCCTGTTGACACAGTGGAGACCCTGTTGACACAGTGGAGACCCTGTTGACACAGTGGAGACCCTGCTGACACAGTGCAGACCC

Function

NR:

description
PREDICTED: vegetative cell wall protein gp1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248856 True 272 lncRNA 0.58 1 5146564 5146835

Neighbor

gene id symbol gene type direction distance location
LOC110507710 LOC106606072 coding upstream 107409 5027793 ~ 5039155 (+)
LOC110507709 LOC106574077 coding upstream 119724 5018589 ~ 5026840 (+)
LOC110516306 LOC105018869 coding upstream 128695 4999319 ~ 5017869 (+)
LOC118936614 LOC106574548 coding upstream 147367 4984705 ~ 4999197 (+)
LOC110507681 sbp1 coding upstream 163077 4975047 ~ 4983487 (+)
zgc:153896 LOC106574856 coding downstream 166797 5313632 ~ 5318428 (+)
LOC110535282 LOC106574835 coding downstream 172503 5301374 ~ 5324765 (+)
LOC110535312 LOC106574762 coding downstream 220797 5367632 ~ 5371403 (+)
LOC110534114 LOC106574714 coding downstream 293260 5440095 ~ 5454489 (+)
LOC118944859 LOC106585606 coding downstream 351709 5498544 ~ 5503473 (+)
G218351 NA non-coding upstream 33035 5113270 ~ 5113529 (+)
G218348 NA non-coding upstream 39545 5106803 ~ 5107019 (+)
G218339 NA non-coding upstream 65538 5079013 ~ 5081026 (+)
G218338 NA non-coding upstream 66519 5078112 ~ 5080045 (+)
G218325 NA non-coding upstream 102405 5042900 ~ 5044159 (+)
G218353 NA non-coding downstream 3720 5150555 ~ 5151016 (+)
G218370 NA non-coding downstream 17385 5164220 ~ 5164522 (+)
G218371 NA non-coding downstream 19328 5166163 ~ 5166362 (+)
G218374 NA non-coding downstream 22857 5169692 ~ 5169906 (+)
G218380 NA non-coding downstream 33914 5180749 ~ 5183039 (+)
G218293 NA other upstream 185114 4945003 ~ 4961450 (+)
G218309 NA other upstream 206670 4937097 ~ 4939894 (+)
G217896 NA other upstream 694008 4451754 ~ 4452556 (+)
G217870 NA other upstream 843708 4297556 ~ 4302856 (+)
G218301 NA other downstream 178592 5325427 ~ 5326009 (+)
G218465 NA other downstream 313257 5460092 ~ 5561271 (+)
LOC110535491 LOC106606078 other downstream 386180 5533015 ~ 5627436 (+)
G218487 NA other downstream 397095 5543930 ~ 5633481 (+)
G218558 NA other downstream 601390 5748225 ~ 5748742 (+)

Expression


Co-expression Network