G218353


Basic Information

Item Value
gene id G218353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5150555 ~ 5151016 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU248848
AATCAATATTGAATATTAGTGCATAGATTTTGGGCTAgtttctatcagaataacataGTGGTTGTTTTTGTGGTGTTAAAGGGggaactgcgttagagctgtcaaaaATCCACAAGCGGCTCATTTCGTTAGCTTGATATGACAATTTATTGCAACAAAAGCACCTGACTTTATAAACTAACAAATCCCATGCAGCAACGTTATAAGTTCATGCAGCAACGTTCAAACATTCAAAAGTGTGATGTTCAGTTGTGTACACCTCGATTGGACAGATAGGCTATTATATAACCCCATCCAAATGAACATGAAaactatcaggtatgaaggtaagactcaggcaatagacaggtcaaggcaggcaggggtcagtaaaccagaggtggggaaCTGTACTGGAcggtaggcaggctcagggtcaggcagagtggtcaggcaggtgggctcagagtcaggacaggcaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248848 True 462 lncRNA 0.47 1 5150555 5151016

Neighbor

gene id symbol gene type direction distance location
LOC110520779 LOC106574086 coding upstream 91 5056537 ~ 5150464 (+)
LOC110507710 LOC106606072 coding upstream 111400 5027793 ~ 5039155 (+)
LOC110507709 LOC106574077 coding upstream 123715 5018589 ~ 5026840 (+)
LOC110516306 LOC105018869 coding upstream 132686 4999319 ~ 5017869 (+)
LOC118936614 LOC106574548 coding upstream 151358 4984705 ~ 4999197 (+)
zgc:153896 LOC106574856 coding downstream 162616 5313632 ~ 5318428 (+)
LOC110535282 LOC106574835 coding downstream 168322 5301374 ~ 5324765 (+)
LOC110535312 LOC106574762 coding downstream 216616 5367632 ~ 5371403 (+)
LOC110534114 LOC106574714 coding downstream 289079 5440095 ~ 5454489 (+)
LOC118944859 LOC106585606 coding downstream 347528 5498544 ~ 5503473 (+)
G218361 NA non-coding upstream 3720 5146564 ~ 5146835 (+)
G218351 NA non-coding upstream 37026 5113270 ~ 5113529 (+)
G218348 NA non-coding upstream 43536 5106803 ~ 5107019 (+)
G218339 NA non-coding upstream 69529 5079013 ~ 5081026 (+)
G218338 NA non-coding upstream 70510 5078112 ~ 5080045 (+)
G218370 NA non-coding downstream 13204 5164220 ~ 5164522 (+)
G218371 NA non-coding downstream 15147 5166163 ~ 5166362 (+)
G218374 NA non-coding downstream 18676 5169692 ~ 5169906 (+)
G218380 NA non-coding downstream 29733 5180749 ~ 5183039 (+)
G218387 NA non-coding downstream 55984 5207000 ~ 5207282 (+)
G218293 NA other upstream 189105 4945003 ~ 4961450 (+)
G218309 NA other upstream 210661 4937097 ~ 4939894 (+)
G217896 NA other upstream 697999 4451754 ~ 4452556 (+)
G217870 NA other upstream 847699 4297556 ~ 4302856 (+)
G218301 NA other downstream 174411 5325427 ~ 5326009 (+)
G218465 NA other downstream 309076 5460092 ~ 5561271 (+)
LOC110535491 LOC106606078 other downstream 381999 5533015 ~ 5627436 (+)
G218487 NA other downstream 392914 5543930 ~ 5633481 (+)
G218558 NA other downstream 597209 5748225 ~ 5748742 (+)

Expression


Co-expression Network