G218370


Basic Information

Item Value
gene id G218370
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5164220 ~ 5164522 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU248865
CTTCATGAATTTTGATTACTGGGCTAAATGCGTGAACAAAAActaggtatttggacataaagattaactttatcgaacaaatcaaacatttattgtggaactgggattcctgggagtgcattctgatgaagatcaccaaaggtaagggaatatttataatgctatttctgacttctgttgactccacaacatggtggatttctgtttggcttgatttgttgtctgagcgccgtactcagattattgcatggtttgcttttccctaaagttttttttaaatctgacacagcggttgcattaagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248865 True 303 lncRNA 0.37 1 5164220 5164522

Neighbor

gene id symbol gene type direction distance location
LOC110520779 LOC106574086 coding upstream 13756 5056537 ~ 5150464 (+)
LOC110507710 LOC106606072 coding upstream 125065 5027793 ~ 5039155 (+)
LOC110507709 LOC106574077 coding upstream 137380 5018589 ~ 5026840 (+)
LOC110516306 LOC105018869 coding upstream 146351 4999319 ~ 5017869 (+)
LOC118936614 LOC106574548 coding upstream 165023 4984705 ~ 4999197 (+)
zgc:153896 LOC106574856 coding downstream 149110 5313632 ~ 5318428 (+)
LOC110535282 LOC106574835 coding downstream 154816 5301374 ~ 5324765 (+)
LOC110535312 LOC106574762 coding downstream 203110 5367632 ~ 5371403 (+)
LOC110534114 LOC106574714 coding downstream 275573 5440095 ~ 5454489 (+)
LOC118944859 LOC106585606 coding downstream 334022 5498544 ~ 5503473 (+)
G218353 NA non-coding upstream 13204 5150555 ~ 5151016 (+)
G218361 NA non-coding upstream 17385 5146564 ~ 5146835 (+)
G218351 NA non-coding upstream 50691 5113270 ~ 5113529 (+)
G218348 NA non-coding upstream 57201 5106803 ~ 5107019 (+)
G218339 NA non-coding upstream 83194 5079013 ~ 5081026 (+)
G218371 NA non-coding downstream 1641 5166163 ~ 5166362 (+)
G218374 NA non-coding downstream 5170 5169692 ~ 5169906 (+)
G218380 NA non-coding downstream 16227 5180749 ~ 5183039 (+)
G218387 NA non-coding downstream 42478 5207000 ~ 5207282 (+)
G218388 NA non-coding downstream 44036 5208558 ~ 5208846 (+)
G218293 NA other upstream 202770 4945003 ~ 4961450 (+)
G218309 NA other upstream 224326 4937097 ~ 4939894 (+)
G217896 NA other upstream 711664 4451754 ~ 4452556 (+)
G217870 NA other upstream 861364 4297556 ~ 4302856 (+)
G218301 NA other downstream 160905 5325427 ~ 5326009 (+)
G218465 NA other downstream 295570 5460092 ~ 5561271 (+)
LOC110535491 LOC106606078 other downstream 368493 5533015 ~ 5627436 (+)
G218487 NA other downstream 379408 5543930 ~ 5633481 (+)
G218558 NA other downstream 583703 5748225 ~ 5748742 (+)

Expression


Co-expression Network