G218389


Basic Information

Item Value
gene id G218389
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5208904 ~ 5209356 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU248884
ctctctctctttctctctcactagcCATTCCATTTGTGTCTACCcctgttacagtttttctcaattgctaaaacactaaaacccattggctgaacaaagttctcagttgcctggactcatttagctaattatgcagtctgttgtcaataccttaaaccatttcacatggtaaaacacaatttgcagatctcacttagacttttcagcaaaactctaaacacattctcattctcaaaacacattctgcactctaatgcacatgtcatccatactggtaaacacaagtggcaacaatcaaatacaaatagagaacacatgtcattgattgaacacaaccactcaaaattgatttaacctgtttcaaatgatgcgacacaaccaatataagccagttcacagagcaaacaggttgttgaaggtgggggagaaagtctgagaatggatagaagAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248884 True 453 lncRNA 0.41 1 5208904 5209356

Neighbor

gene id symbol gene type direction distance location
LOC110520779 LOC106574086 coding upstream 58440 5056537 ~ 5150464 (+)
LOC110507710 LOC106606072 coding upstream 169749 5027793 ~ 5039155 (+)
LOC110507709 LOC106574077 coding upstream 182064 5018589 ~ 5026840 (+)
LOC110516306 LOC105018869 coding upstream 191035 4999319 ~ 5017869 (+)
LOC118936614 LOC106574548 coding upstream 209707 4984705 ~ 4999197 (+)
zgc:153896 LOC106574856 coding downstream 104276 5313632 ~ 5318428 (+)
LOC110535282 LOC106574835 coding downstream 109982 5301374 ~ 5324765 (+)
LOC110535312 LOC106574762 coding downstream 158276 5367632 ~ 5371403 (+)
LOC110534114 LOC106574714 coding downstream 230739 5440095 ~ 5454489 (+)
LOC118944859 LOC106585606 coding downstream 289188 5498544 ~ 5503473 (+)
G218388 NA non-coding upstream 58 5208558 ~ 5208846 (+)
G218387 NA non-coding upstream 1622 5207000 ~ 5207282 (+)
G218380 NA non-coding upstream 25865 5180749 ~ 5183039 (+)
G218374 NA non-coding upstream 38998 5169692 ~ 5169906 (+)
G218371 NA non-coding upstream 42542 5166163 ~ 5166362 (+)
G218390 NA non-coding downstream 1718 5211074 ~ 5211321 (+)
G218395 NA non-coding downstream 9375 5218731 ~ 5219259 (+)
G218436 NA non-coding downstream 118610 5327966 ~ 5328597 (+)
G218298 NA non-coding downstream 119376 5328732 ~ 5330211 (+)
G218293 NA other upstream 247454 4945003 ~ 4961450 (+)
G218309 NA other upstream 269010 4937097 ~ 4939894 (+)
G217896 NA other upstream 756348 4451754 ~ 4452556 (+)
G217870 NA other upstream 906048 4297556 ~ 4302856 (+)
G218301 NA other downstream 116071 5325427 ~ 5326009 (+)
G218465 NA other downstream 250736 5460092 ~ 5561271 (+)
LOC110535491 LOC106606078 other downstream 323659 5533015 ~ 5627436 (+)
G218487 NA other downstream 334574 5543930 ~ 5633481 (+)
G218558 NA other downstream 538869 5748225 ~ 5748742 (+)

Expression


Co-expression Network