G218437


Basic Information

Item Value
gene id G218437
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5330703 ~ 5331486 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU248933
ATGGTACAGTATCGACAGAATATGTTGTCCCTTGCTGAAAACCTCAGTACCTACCCTTCCTGAGATGCCTTTAATCTGTCTGTTACTGAGGTGTGTGAAGTCCACAGTGATGTAGCCTTCCATTGCAGTCAGCAGGTTGTTTGAAGCACAGTTGGAGGAGTTGGCCTCCTCCCACCAGCTCCCCTGGTAACCGCCAGGGAGGATCCACTGATACCTCCCGCCAAACATGTTCAGGCTGTAAGCCTAGAAGACAAAGGTTATATGGTAATTACAAACACAAATGGTTATCATAACGATAATTCAAAAGTAATTGCATGATGAATGCGCTGTTAAACTGCTATTAATCTTTGTCTCAAACAAGTGCTAATCATTAATGATGGCATTGTGTTGCAACGCATCATATTGTAATGTAGGTTTTCTGGTTATGTACTCACACAGCAAAATACTTTGGAGGCTGAATTCTCGTCAAACAACCCAATAATGATCGTTACATCCATATCCTGTCGAAAGGGACATGATACAAAACAGATTGACACGCTGAGGATGCATCTGCAATTTACTGAAATAATGCAATTCAGTGCCAAATTCTAACTTTGTAAGTAAAGATGATTTGGGCATATTACTCACCTTCAATTTCTTTACATTGACACATGGGTCAGTGGACAGGCTTTCAGTTACAGCAACCATAACATCAGCCTTGCTCAGTTGTTTAGTCAGATCTCTCCTTATCTTTCAAAGACAGGACAATATAGACTTTACAATTCATACATAAGACAGCATAGTT

Function

NR:

description
gamma-aminobutyric acid type B receptor subunit 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248933 True 784 lncRNA 0.40 1 5330703 5331486

Neighbor

gene id symbol gene type direction distance location
LOC110535282 LOC106574835 coding upstream 6803 5301374 ~ 5324765 (+)
zgc:153896 LOC106574856 coding upstream 12275 5313632 ~ 5318428 (+)
LOC110520779 LOC106574086 coding upstream 180239 5056537 ~ 5150464 (+)
LOC110507710 LOC106606072 coding upstream 291548 5027793 ~ 5039155 (+)
LOC110507709 LOC106574077 coding upstream 303863 5018589 ~ 5026840 (+)
LOC110535312 LOC106574762 coding downstream 36146 5367632 ~ 5371403 (+)
LOC110534114 LOC106574714 coding downstream 108609 5440095 ~ 5454489 (+)
LOC118944859 LOC106585606 coding downstream 167058 5498544 ~ 5503473 (+)
LOC110493157 LOC106585480 coding downstream 172605 5504091 ~ 5537123 (+)
LOC118944860 NA coding downstream 188605 5520091 ~ 5520401 (+)
G218297 LOC106605869 non-coding upstream 145 5330316 ~ 5330558 (+)
G218298 NA non-coding upstream 492 5328732 ~ 5330211 (+)
G218436 NA non-coding upstream 2106 5327966 ~ 5328597 (+)
G218395 NA non-coding upstream 111444 5218731 ~ 5219259 (+)
G218441 NA non-coding downstream 16040 5347526 ~ 5349161 (+)
G218294 NA non-coding downstream 25072 5356558 ~ 5456396 (+)
G218295 NA non-coding downstream 28214 5359700 ~ 5410101 (+)
G218455 NA non-coding downstream 88180 5419666 ~ 5420782 (+)
G218463 NA non-coding downstream 125866 5457352 ~ 5559071 (+)
G218301 NA other upstream 4694 5325427 ~ 5326009 (+)
G218293 NA other upstream 369253 4945003 ~ 4961450 (+)
G218309 NA other upstream 390809 4937097 ~ 4939894 (+)
G217896 NA other upstream 878147 4451754 ~ 4452556 (+)
G218465 NA other downstream 128606 5460092 ~ 5561271 (+)
LOC110535491 LOC106606078 other downstream 201529 5533015 ~ 5627436 (+)
G218487 NA other downstream 212444 5543930 ~ 5633481 (+)
G218558 NA other downstream 416739 5748225 ~ 5748742 (+)
LOC110508149 LOC106593364 other downstream 559040 5822391 ~ 5898142 (+)

Expression


Co-expression Network