G219459


Basic Information

Item Value
gene id G219459
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5412364 ~ 5414964 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU250324
atatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaatatgagagaggcctgtaattttcatgataggttcacattgtaggatttaaaatgaatttatttgcaaatatttATATATGTGTCTGCCTCTCCAAGAGGTATTTTCTATAGACATACTGTATGCTCCACGCCAGtttatactgtctatatactgcTCCAAGCCAGTTTATACTGTgtgtatatatactgcgCCAAGCCAGTTAATACTGTTTATATACTGCTCCACGCCAgtttatactgtgtatatatactgctccaagccagtttatactgtgtgtatatatactgctccaagccagtttatactgtgtgtatatatactgctccaagccagtttatactgtgtatatatactgctCCAAGCCAGTTTATACTGTGTCTATATATACTGCtccaagccagttgaagttggaagtttacatacaccttagccaaatacatttaaactcagtttttcacaattcctgacgttttctgagtaaaaattccctgtattaggtcggttaggatcaccactttattttaagaatgtgaaatgtcaaaataaaagtAGAGCatgattttatttcagcgtttatttatttcatcacattcccagtgggtcagaagtttaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250324 True 679 lncRNA 0.37 6 5412364 5414964

Neighbor

gene id symbol gene type direction distance location
LOC110535340 LOC106574784 coding downstream 56828 5352140 ~ 5355536 (-)
LOC110515205 ci023 coding downstream 76790 5333873 ~ 5335574 (-)
LOC110535324 LOC106605869 coding downstream 78740 5324124 ~ 5333624 (-)
LOC110534068 LOC106574842 coding downstream 100026 5230340 ~ 5312338 (-)
LOC110507711 LOC106574107 coding downstream 358034 5042896 ~ 5054330 (-)
LOC110517595 LOC106585541 coding upstream 42562 5457526 ~ 5492523 (-)
LOC110513540 LOC106585541 coding upstream 143030 5557994 ~ 5590146 (-)
LOC110533792 LOC106605966 coding upstream 308718 5723682 ~ 5725550 (-)
LOC110535565 LOC106606103 coding upstream 340096 5755060 ~ 5766123 (-)
LOC110535576 LOC106586326 coding upstream 363856 5778820 ~ 5790359 (-)
G219450 NA non-coding downstream 73903 5338247 ~ 5338461 (-)
G219449 NA non-coding downstream 80308 5331829 ~ 5332056 (-)
G219388 NA non-coding downstream 200721 5211348 ~ 5211643 (-)
G219387 NA non-coding downstream 203066 5208876 ~ 5209298 (-)
G219386 NA non-coding downstream 205780 5206164 ~ 5206584 (-)
G219464 NA non-coding upstream 10775 5425739 ~ 5426232 (-)
G219491 NA non-coding upstream 93077 5508041 ~ 5603177 (-)
G219494 NA non-coding upstream 102432 5517396 ~ 5611217 (-)
G219495 NA non-coding upstream 104399 5519363 ~ 5612281 (-)
G219496 NA non-coding upstream 104828 5519792 ~ 5618681 (-)
G219290 LOC106593286 other downstream 402958 5008084 ~ 5009406 (-)
G219200 NA other downstream 640313 4770350 ~ 4772051 (-)
LOC118944839 LOC106573494 other downstream 763561 4634932 ~ 4648920 (-)
LOC118944829 LOC106606066 other downstream 871923 4535483 ~ 4553394 (-)
G218073 LOC106605488 other downstream 971927 4439096 ~ 4440437 (-)
G219500 NA other upstream 272761 5687725 ~ 5688291 (-)
G219591 NA other upstream 333194 5748158 ~ 5748714 (-)
G219592 NA other upstream 336760 5751724 ~ 5752094 (-)
LOC110534138 LOC106605946 other upstream 914638 6329602 ~ 6349701 (-)
G219820 LOC106605946 other upstream 918004 6332968 ~ 6338813 (-)

Expression


Co-expression Network