G219543


Basic Information

Item Value
gene id G219543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5669425 ~ 5679757 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU250426
GGGATCTTCTTCATGAAGTTCATGTCCACCTTGCTGAAGTCCACagtgctgttctctctgcttcctccGTTGATGCGGCTCTCACTCGGTTTACTGTTCTCCAGGTTCCCAGGAGCTGACTGGGGGGATGCCAGGAGGCAGTTTCTCTCAAGCAGGTGTGGGTCAGATTGTTTCTTGCCGATGTCAGCGAAGGAGCGCACCAGAGGGATGCGGTTGCTGAGCTTCTTCTCGTTCTGGTGGTGGTGTCTCTTCAACATGGCCTCCCTCACCTTCTGCCTCAACTCCTCCTCCAGCTGAGCCGACGCCACCATGCTGTCTATCACCATGTCTATGGGGGTACAGGGTAGACTGCATGCTTTATTCAACAGTTACATGCATATTTAACACATTCAACtttcagactcacacacacagtaaaatgtCTGCagagacatacatacacactcaccTGCGATCTCCTCAATGGTGTTAGCTCTCATGTCCAACATGACAGTGCCGTTGAGGATGCAGCTGCGGAGCTCGAAGAGGCTGTGGAGAGACAGCGTGGCTACGTAGGGCTTACTCCAACgctcccctccatcctccacgTCTTCCTCAAACTTTAACCACCTAAACACACAGATGAAAGGAGCTGTTGATGTTTCCTCATCCAACCACATCCACTAGGAGTAGTGAGGAAGGGTGCGCGTCATGCCTGGCTGTCTCCCTCCACTCGTAGACGTGTCCGTCCCGGAAGAACAGCTCGTCCAGCTCAGTGAACAGGTCGTGGGGCATGTgctcttcatcatcatcctctgTCCCCAGGATGAACTGGACCCGCTGGGACGGGGTGTCTGAAACACAGGGGGTACAGGCGGAAGATGGGTAATGTAGTACAACCAAGGGGAATATTAGTGGAAAAAGGACAGTAAAAGGTTTGGTATAGGAAACAGGGCTGGAGAACGGATATATGGCAATAGAGCTGATCTGAGGACAGTGAATGAAGCAGACGTTGAGGTGGGAGAGTGAACTGGTCTTAGCTACCATAGGAAGGAGACTCTCGTCCATCTTCATGGTCCGAGCGGTCTCTCCTCTTGCGGTGGTGTCTGTGGCCGCGGTGGCTGCGGTGGTGCCTCCGTTTGGTCTCTCTGCCCAG

Function

NR:

description
sodium bicarbonate cotransporter 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250426 True 1135 lncRNA 0.36 3 5669425 5679757

Neighbor

gene id symbol gene type direction distance location
LOC110513540 LOC106585541 coding downstream 79279 5557994 ~ 5590146 (-)
LOC110517595 LOC106585541 coding downstream 176902 5457526 ~ 5492523 (-)
LOC110535504 LOC106574737 coding downstream 229522 5376122 ~ 5439903 (-)
LOC110535340 LOC106574784 coding downstream 313889 5352140 ~ 5355536 (-)
LOC110515205 ci023 coding downstream 333851 5333873 ~ 5335574 (-)
LOC110533792 LOC106605966 coding upstream 43925 5723682 ~ 5725550 (-)
LOC110535565 LOC106606103 coding upstream 75303 5755060 ~ 5766123 (-)
LOC110535576 LOC106586326 coding upstream 99063 5778820 ~ 5790359 (-)
LOC110535585 LOC106586334 coding upstream 110710 5790467 ~ 5797248 (-)
LOC110490516 LOC106574265 coding upstream 117161 5796918 ~ 5799016 (-)
G219541 NA non-coding downstream 5454 5663577 ~ 5663971 (-)
G219501 LOC106606078 non-coding downstream 41905 5535168 ~ 5627520 (-)
G219499 NA non-coding downstream 47303 5527982 ~ 5622122 (-)
G219498 NA non-coding downstream 48205 5526375 ~ 5621220 (-)
G219496 NA non-coding downstream 50744 5519792 ~ 5618681 (-)
G219550 LOC106585489 non-coding upstream 448 5680205 ~ 5682782 (-)
G219552 NA non-coding upstream 5198 5684955 ~ 5685316 (-)
G219503 LOC106585489 non-coding upstream 8916 5688673 ~ 5689762 (-)
G219559 NA non-coding upstream 26472 5706229 ~ 5707402 (-)
G219562 NA non-coding upstream 28644 5708401 ~ 5708629 (-)
G219290 LOC106593286 other downstream 660019 5008084 ~ 5009406 (-)
G219200 NA other downstream 897374 4770350 ~ 4772051 (-)
LOC118944839 LOC106573494 other downstream 1020622 4634932 ~ 4648920 (-)
LOC118944829 LOC106606066 other downstream 1128984 4535483 ~ 4553394 (-)
G218073 LOC106605488 other downstream 1228988 4439096 ~ 4440437 (-)
G219500 NA other upstream 7968 5687725 ~ 5688291 (-)
G219591 NA other upstream 68401 5748158 ~ 5748714 (-)
G219592 NA other upstream 71967 5751724 ~ 5752094 (-)
LOC110534138 LOC106605946 other upstream 649845 6329602 ~ 6349701 (-)
G219820 LOC106605946 other upstream 653211 6332968 ~ 6338813 (-)

Expression


Co-expression Network