G219500


Basic Information

Item Value
gene id G219500
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5687725 ~ 5688291 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU250378
TAACAAAAAGCTGGTCTACAGAGAGGTCTTGACAAATGTTGGTGGTGCATACAACGTagagacagGTGAATTCACGGCTCCGGATCGTGGAGTCTACTACATCCGGTTCACGGCCAACGCTCCTACAGACGTCAGCTTGAGCTCCATGCTGTATAAGAACGGCGCCAAAGTCATTCTGGCCGCTCACGAGAGTCCGTCCGGCGAGGGCAGCGACACGGCGTCTAACGGAGCCACTCTGCTGCTGGAGGAGGGAGACAGTCTGCAAATGATGCTGTGGGCCAACACCCAGGTCTGGGACAACGCCAACCACCACAGCACCTTCAGCggcttcctcctcttccccatgCCACAGCAGCTGAAGCAATAGGTCTACATCCCTCTTCCCCATGACACACCAACCAGAGACAGAGGTGTACATACACAGTAGCATTGTTTTCAACTGTTGTCAAATCAGACTGAATTAAAAATAACATTGAGGTGAAAGTCTGCTTATtc

Function

NR:

description
complement C1q-like protein 4

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU250378 True 495 TUCP 0.52 2 5687725 5688291

Neighbor

gene id symbol gene type direction distance location
LOC110513540 LOC106585541 coding downstream 97579 5557994 ~ 5590146 (-)
LOC110517595 LOC106585541 coding downstream 195202 5457526 ~ 5492523 (-)
LOC110535504 LOC106574737 coding downstream 247822 5376122 ~ 5439903 (-)
LOC110535340 LOC106574784 coding downstream 332189 5352140 ~ 5355536 (-)
LOC110515205 ci023 coding downstream 352151 5333873 ~ 5335574 (-)
LOC110533792 LOC106605966 coding upstream 35391 5723682 ~ 5725550 (-)
LOC110535565 LOC106606103 coding upstream 66769 5755060 ~ 5766123 (-)
LOC110535576 LOC106586326 coding upstream 90529 5778820 ~ 5790359 (-)
LOC110535585 LOC106586334 coding upstream 102176 5790467 ~ 5797248 (-)
LOC110490516 LOC106574265 coding upstream 108627 5796918 ~ 5799016 (-)
G219552 NA non-coding downstream 2409 5684955 ~ 5685316 (-)
G219550 LOC106585489 non-coding downstream 4943 5680205 ~ 5682782 (-)
G219543 NA non-coding downstream 7968 5669425 ~ 5679757 (-)
G219541 NA non-coding downstream 23754 5663577 ~ 5663971 (-)
G219501 LOC106606078 non-coding downstream 60205 5535168 ~ 5627520 (-)
G219503 LOC106585489 non-coding upstream 382 5688673 ~ 5689762 (-)
G219559 NA non-coding upstream 17938 5706229 ~ 5707402 (-)
G219562 NA non-coding upstream 20110 5708401 ~ 5708629 (-)
G219563 NA non-coding upstream 22994 5711285 ~ 5711547 (-)
G219564 NA non-coding upstream 24487 5712778 ~ 5713205 (-)
G219290 LOC106593286 other downstream 678319 5008084 ~ 5009406 (-)
G219200 NA other downstream 915674 4770350 ~ 4772051 (-)
LOC118944839 LOC106573494 other downstream 1038922 4634932 ~ 4648920 (-)
LOC118944829 LOC106606066 other downstream 1147284 4535483 ~ 4553394 (-)
G218073 LOC106605488 other downstream 1247288 4439096 ~ 4440437 (-)
G219591 NA other upstream 59867 5748158 ~ 5748714 (-)
G219592 NA other upstream 63433 5751724 ~ 5752094 (-)
LOC110534138 LOC106605946 other upstream 641311 6329602 ~ 6349701 (-)
G219820 LOC106605946 other upstream 644677 6332968 ~ 6338813 (-)
LOC110507902 LOC106593870 other upstream 798209 6479543 ~ 6491729 (-)

Expression


Co-expression Network